RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 OTOFQ9HC10 1997 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 EEF2P13639 858 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 PTPRAP18433 802 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 GUCY1A2P33402 732 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 TROAPQ12815 778 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 CUL4AQ13619 759 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 PRAMEF18Q5VWM3 479 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 FANCBQ8NB91 859 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 ZNF280CQ8ND82 737 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 RGS22Q8NE09 1264 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 GTF3C6Q969F1 213 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 GMCL1Q96IK5 515 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 TMX3Q96JJ7 454 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 TCEANC2Q96MN5 208 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 TPCN1Q9ULQ1 816 aa12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 SCAF8Q9UPN6 1271 aaKnown RBP12.07□□□□□ -0.48
CLPTM1-207ENST00000587537 SPDYE5A6NIY4 337 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 GOLGA8AA7E2F4 631 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 USP17L10C9JJH3 530 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 CXCL11O14625 94 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 CPLX1O14810 134 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 NMT2O60551 498 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 CELF2O95319 508 aaKnown RBP12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 HSP90AA1P07900 732 aaKnown RBP12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 SNHG28P0DPA3 235 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 INPP5BP32019 993 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 HMGN5P82970 282 aaKnown RBP12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 VGLL4Q14135 290 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 RTN1Q16799 776 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 FAM177A1Q8N128 213 aaPredicted RBP12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 HHIPL1Q96JK4 782 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 FEZ1Q99689 392 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 VCPKMTQ9H867 229 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 PASKQ96RG2 1323 aa12.06□□□□□ -0.48
CLPTM1-207ENST00000587537 PHIPQ8WWQ0 1821 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 PLA2G6O60733 806 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 PARP1P09874 1014 aaKnown RBP12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 ATP2B2Q01814 1243 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 TRAF1Q13077 416 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 PPIL2Q13356 520 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 RRP1BQ14684 758 aaKnown RBP12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 GRM4Q14833 912 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 ME3Q16798 604 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 USP17L2Q6R6M4 530 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 MICU3Q86XE3 530 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 ZKSCAN4Q969J2 545 aaPredicted RBP12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 SLC10A4Q96EP9 437 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 C12orf42Q96LP6 360 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 IPO9Q96P70 1041 aaKnown RBP12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 BRPF3Q9ULD4 1205 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 NAP1L2Q9ULW6 460 aaPredicted RBP12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 SNCAIPQ9Y6H5 919 aa12.05□□□□□ -0.48
CLPTM1-207ENST00000587537 F5H6K3 240 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 TRAF5O00463 557 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 WDR46O15213 610 aaKnown RBP12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 ZBTB48P10074 688 aaPredicted RBP12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 FDX1P10109 184 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 SLC1A4P43007 532 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 BACE1P56817 501 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 KLRC3Q07444 240 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 SH3D19Q5HYK7 790 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 TRIM22Q8IYM9 498 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 PROCA1Q8NCQ7 364 aaPredicted RBP12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 WASF1Q92558 559 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 AFG3L2Q9Y4W6 797 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 ZHX2Q9Y6X8 837 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 STK36Q9NRP7 1315 aa12.04□□□□□ -0.48
CLPTM1-207ENST00000587537 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 hCG_1984214I3L0E3 225 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 CD2BP2O95400 341 aaKnown RBP12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 PDHBP11177 359 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 IFNAR1P17181 557 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 PDCP20941 246 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 ZNF543Q08ER8 600 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 COL9A3Q14050 684 aaPredicted RBP12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 SLFN13Q68D06 897 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 FASTKD5Q7L8L6 764 aaKnown RBP12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 FAM160B2Q86V87 743 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 SIAH1Q8IUQ4 282 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 TEX2Q8IWB9 1127 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 ZNF713Q8N859 430 aaPredicted RBP12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 CHURC1Q8WUH1 139 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 SPZ1Q9BXG8 430 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 ZNF408Q9H9D4 720 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 HPS5Q9UPZ3 1129 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 KCNH4Q9UQ05 1017 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 MYPNQ86TC9 1320 aa12.03□□□□□ -0.48
CLPTM1-207ENST00000587537 TMEM88BA6NKF7 163 aa12.02□□□□□ -0.49
CLPTM1-207ENST00000587537 SLURP2P0DP57 97 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms