RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 ITGBL1O95965 494 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-211ENST00000586988 PDIA3P30101 505 aaKnown RBP13.78□□□□□ -0.2
DNMT1-211ENST00000586988 KIF5BP33176 963 aa13.78□□□□□ -0.2
DNMT1-211ENST00000586988 SHROOM1Q2M3G4 852 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-211ENST00000586988 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-211ENST00000586988 CLEC10AQ8IUN9 316 aa13.78□□□□□ -0.2
DNMT1-211ENST00000586988 LRRC47Q8N1G4 583 aaKnown RBP13.78□□□□□ -0.2
DNMT1-211ENST00000586988 ZNF784Q8NCA9 323 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-211ENST00000586988 GMCL1P1Q8NEA9 526 aa13.78□□□□□ -0.2
DNMT1-211ENST00000586988 CTCFLQ8NI51 663 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-211ENST00000586988 MKL1Q969V6 931 aa13.78□□□□□ -0.2
DNMT1-211ENST00000586988 GOPCQ9HD26 462 aa13.78□□□□□ -0.2
DNMT1-211ENST00000586988 RBM28Q9NW13 759 aaKnown RBP13.78□□□□□ -0.2
DNMT1-211ENST00000586988 BRPF3Q9ULD4 1205 aa13.78□□□□□ -0.2
DNMT1-211ENST00000586988 FZD1Q9UP38 647 aa13.78□□□□□ -0.2
DNMT1-211ENST00000586988 SNCAIPQ9Y6H5 919 aa13.78□□□□□ -0.2
DNMT1-211ENST00000586988 PFKFB2O60825 505 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 HSP90AA1P07900 732 aaKnown RBP13.77□□□□□ -0.21
DNMT1-211ENST00000586988 PTPRAP18433 802 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 USP14P54578 494 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 JAG1P78504 1218 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 TROAPQ12815 778 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 FSTL1Q12841 308 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 ME3Q16798 604 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 RTN1Q16799 776 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 CPLX2Q6PUV4 134 aaKnown RBP13.77□□□□□ -0.21
DNMT1-211ENST00000586988 NUP133Q8WUM0 1156 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 PHIPQ8WWQ0 1821 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 GTF3C6Q969F1 213 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 PASKQ96RG2 1323 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 WDR18Q9BV38 432 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 SENP2Q9HC62 589 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 TMX2Q9Y320 296 aa13.77□□□□□ -0.21
DNMT1-211ENST00000586988 SPDYE5A6NIY4 337 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 CPLX1O14810 134 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 CDKL5O76039 1030 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 LARGE1O95461 756 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 GNAQP50148 359 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 STK3Q13188 491 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 LDLRAD1Q5T700 205 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 ERO1BQ86YB8 467 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 DCAF4Q8WV16 495 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 LARP6Q9BRS8 491 aaKnown RBP13.76□□□□□ -0.21
DNMT1-211ENST00000586988 MYL10Q9BUA6 226 aa13.76□□□□□ -0.21
DNMT1-211ENST00000586988 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-211ENST00000586988 USP17L10C9JJH3 530 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 SNHG28P0DPA3 235 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 PDHBP11177 359 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 PPATQ06203 517 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 SCRN1Q12765 414 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 CUL4AQ13619 759 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 GRM4Q14833 912 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 ASPRV1Q53RT3 343 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 GPATCH4Q5T3I0 446 aaKnown RBP13.75□□□□□ -0.21
DNMT1-211ENST00000586988 CCDC83Q8IWF9 413 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 FANCBQ8NB91 859 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 LPAR1Q92633 364 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 INTS4Q96HW7 963 aaKnown RBP13.75□□□□□ -0.21
DNMT1-211ENST00000586988 GMCL1Q96IK5 515 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 KIAA1683Q9H0B3 1180 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 VCPKMTQ9H867 229 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 ELP3Q9H9T3 547 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-211ENST00000586988 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 ZHX2Q9Y6X8 837 aa13.75□□□□□ -0.21
DNMT1-211ENST00000586988 A0A1W2PRG0 241 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 C19orf81C9J6K1 198 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 UBE2Q2LH0YL09 131 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 RAD21O60216 631 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
DNMT1-211ENST00000586988 RXRAP19793 462 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 ECE1P42892 770 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 SLC1A4P43007 532 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 CCT2P78371 535 aaKnown RBP13.74□□□□□ -0.21
DNMT1-211ENST00000586988 FMR1Q06787 632 aaKnown RBP eCLIP13.74□□□□□ -0.213e-7■■■■■ 28.9
DNMT1-211ENST00000586988 PPIL2Q13356 520 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 MTMR2Q13614 643 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 CCDC96Q2M329 555 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 SLFN13Q68D06 897 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 MOB2Q70IA6 237 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 SIAH1Q8IUQ4 282 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 ACER1Q8TDN7 264 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 IPO9Q96P70 1041 aaKnown RBP13.74□□□□□ -0.21
DNMT1-211ENST00000586988 LZTS2Q9BRK4 669 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
DNMT1-211ENST00000586988 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
DNMT1-211ENST00000586988 LOC285556D6RIA3 1793 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 TRIM75PA6NK02 468 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 F5H6K3 240 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 NDUFB10O96000 172 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 BACE1P56817 501 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 KLRC3Q07444 240 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 ZNF543Q08ER8 600 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 CCDC84Q86UT8 332 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-211ENST00000586988 RAB11FIP4Q86YS3 637 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 CCDC144CPQ8IYA2 1237 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
DNMT1-211ENST00000586988 SLC10A4Q96EP9 437 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms