RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 LBX2Q6XYB7 198 aa13.74□□□□□ -0.21
LRFN3-202ENST00000585876 GMCL1P1Q8NEA9 526 aa13.74□□□□□ -0.21
LRFN3-202ENST00000585876 ZNF296Q8WUU4 475 aaPredicted RBP13.74□□□□□ -0.21
LRFN3-202ENST00000585876 CNNM2Q9H8M5 875 aa13.74□□□□□ -0.21
LRFN3-202ENST00000585876 GOPCQ9HD26 462 aa13.74□□□□□ -0.21
LRFN3-202ENST00000585876 INCENPQ9NQS7 918 aa13.74□□□□□ -0.21
LRFN3-202ENST00000585876 IL17RBQ9NRM6 502 aa13.74□□□□□ -0.21
LRFN3-202ENST00000585876 ZNF236Q9UL36 1845 aa13.74□□□□□ -0.21
LRFN3-202ENST00000585876 MYPNQ86TC9 1320 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 WDR46O15213 610 aaKnown RBP13.73□□□□□ -0.21
LRFN3-202ENST00000585876 RANBP6O60518 1105 aaKnown RBP13.73□□□□□ -0.21
LRFN3-202ENST00000585876 FKTNO75072 461 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 GCLCP48506 637 aaPredicted RBP13.73□□□□□ -0.21
LRFN3-202ENST00000585876 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 KIAA1755Q5JYT7 1200 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 KIAA1211Q6ZU35 1233 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 GTF3C2Q8WUA4 911 aaPredicted RBP13.73□□□□□ -0.21
LRFN3-202ENST00000585876 ESR2Q92731 530 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 RBM8AQ9Y5S9 174 aaKnown RBP13.73□□□□□ -0.21
LRFN3-202ENST00000585876 PLXNB2O15031 1838 aa13.73□□□□□ -0.21
LRFN3-202ENST00000585876 OSBPP22059 807 aa13.72□□□□□ -0.21
LRFN3-202ENST00000585876 IRX3P78415 501 aaPredicted RBP13.72□□□□□ -0.21
LRFN3-202ENST00000585876 SP3Q02447 781 aa13.72□□□□□ -0.21
LRFN3-202ENST00000585876 NECTIN1Q15223 517 aa13.72□□□□□ -0.21
LRFN3-202ENST00000585876 ZYXQ15942 572 aaKnown RBP13.72□□□□□ -0.21
LRFN3-202ENST00000585876 FAM110CQ1W6H9 321 aa13.72□□□□□ -0.21
LRFN3-202ENST00000585876 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
LRFN3-202ENST00000585876 NKX2-3Q8TAU0 364 aa13.72□□□□□ -0.21
LRFN3-202ENST00000585876 SMCR8Q8TEV9 937 aaPredicted RBP13.72□□□□□ -0.21
LRFN3-202ENST00000585876 KRT23Q9C075 422 aa13.72□□□□□ -0.21
LRFN3-202ENST00000585876 RPAP3Q9H6T3 665 aaPredicted RBP13.72□□□□□ -0.21
LRFN3-202ENST00000585876 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
LRFN3-202ENST00000585876 MORF4L1Q9UBU8 362 aa13.72□□□□□ -0.21
LRFN3-202ENST00000585876 EPB41L2O43491 1005 aaKnown RBP13.71□□□□□ -0.21
LRFN3-202ENST00000585876 NMT2O60551 498 aa13.71□□□□□ -0.21
LRFN3-202ENST00000585876 HERVK_113P62684 666 aa13.71□□□□□ -0.21
LRFN3-202ENST00000585876 RCSD1Q6JBY9 416 aa13.71□□□□□ -0.21
LRFN3-202ENST00000585876 ERO1AQ96HE7 468 aa13.71□□□□□ -0.21
LRFN3-202ENST00000585876 TTC14Q96N46 770 aa13.71□□□□□ -0.21
LRFN3-202ENST00000585876 TAF6LQ9Y6J9 622 aa13.71□□□□□ -0.21
LRFN3-202ENST00000585876 F5H6K3 240 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 KDM4AO75164 1064 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 NDUFB10O96000 172 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 LACTBP83111 547 aaPredicted RBP13.7□□□□□ -0.22
LRFN3-202ENST00000585876 KLRC3Q07444 240 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 RRP12Q5JTH9 1297 aaKnown RBP13.7□□□□□ -0.22
LRFN3-202ENST00000585876 ANKS1AQ92625 1134 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 GMCL1Q96IK5 515 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 CLIP2Q9UDT6 1046 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 CPA4Q9UI42 421 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 STX8Q9UNK0 236 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 MYH6P13533 1939 aa13.7□□□□□ -0.22
LRFN3-202ENST00000585876 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
LRFN3-202ENST00000585876 B4E1Z4 1266 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 E7EWF7 191 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 GNRH1P01148 92 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 ATP2B2Q01814 1243 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 CCDC178Q5BJE1 867 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 COL13A1Q5TAT6 717 aaPredicted RBP13.69□□□□□ -0.22
LRFN3-202ENST00000585876 POTEEQ6S8J3 1075 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 STOX1Q6ZVD7 989 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 CTU1Q7Z7A3 348 aaKnown RBP13.69□□□□□ -0.22
LRFN3-202ENST00000585876 IQCA1Q86XH1 822 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 DGKHQ86XP1 1220 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 SPICE1Q8N0Z3 855 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 P2RX7Q99572 595 aaKnown RBP13.69□□□□□ -0.22
LRFN3-202ENST00000585876 TANGO6Q9C0B7 1094 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 ZSWIM5Q9P217 1185 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 ADAMTS5Q9UNA0 930 aa13.69□□□□□ -0.22
LRFN3-202ENST00000585876 ZNFX1Q9P2E3 1918 aaKnown RBP13.68□□□□□ -0.22
LRFN3-202ENST00000585876 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
LRFN3-202ENST00000585876 SLC27A2O14975 620 aa13.68□□□□□ -0.22
LRFN3-202ENST00000585876 REC8O95072 547 aa13.68□□□□□ -0.22
LRFN3-202ENST00000585876 TOP1P11387 765 aaKnown RBP13.68□□□□□ -0.22
LRFN3-202ENST00000585876 CAP1Q01518 475 aa13.68□□□□□ -0.22
LRFN3-202ENST00000585876 TRDNQ13061 729 aa13.68□□□□□ -0.22
LRFN3-202ENST00000585876 COG2Q14746 738 aa13.68□□□□□ -0.22
LRFN3-202ENST00000585876 TSGA10IPQ3SY00 556 aa13.68□□□□□ -0.22
LRFN3-202ENST00000585876 CREB3L3Q68CJ9 461 aa13.68□□□□□ -0.22
LRFN3-202ENST00000585876 MB21D2Q8IYB1 491 aaPredicted RBP13.68□□□□□ -0.22
LRFN3-202ENST00000585876 LRRC47Q8N1G4 583 aaKnown RBP13.68□□□□□ -0.22
LRFN3-202ENST00000585876 KCNB2Q92953 911 aa13.68□□□□□ -0.22
LRFN3-202ENST00000585876 RABGAP1Q9Y3P9 1069 aa13.68□□□□□ -0.22
LRFN3-202ENST00000585876 TNKSO95271 1327 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 PLA2G6O60733 806 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 ARHGEF6Q15052 776 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 PKN2Q16513 984 aaKnown RBP13.67□□□□□ -0.22
LRFN3-202ENST00000585876 FAM83BQ5T0W9 1011 aa13.67□□□□□ -0.22
LRFN3-202ENST00000585876 RNF20Q5VTR2 975 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms