RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 GOLGA8BA8MQT2 603 aa20.83■□□□□ 0.92
RBFOX1-222ENST00000585867 PPATQ06203 517 aa20.83■□□□□ 0.92
RBFOX1-222ENST00000585867 OPTNQ96CV9 577 aa20.83■□□□□ 0.92
RBFOX1-222ENST00000585867 OTUD5Q96G74 571 aa20.83■□□□□ 0.92
RBFOX1-222ENST00000585867 CEP95Q96GE4 821 aa20.83■□□□□ 0.92
RBFOX1-222ENST00000585867 HHIPL1Q96JK4 782 aa20.83■□□□□ 0.92
RBFOX1-222ENST00000585867 RCAN1P53805 252 aa20.82■□□□□ 0.92
RBFOX1-222ENST00000585867 ICA1Q05084 483 aa20.82■□□□□ 0.92
RBFOX1-222ENST00000585867 ST3GAL1Q11201 340 aa20.82■□□□□ 0.92
RBFOX1-222ENST00000585867 ZSCAN10Q96SZ4 725 aaPredicted RBP20.82■□□□□ 0.92
RBFOX1-222ENST00000585867 AS3MTQ9HBK9 375 aa20.82■□□□□ 0.92
RBFOX1-222ENST00000585867 MTMR4Q9NYA4 1195 aa20.82■□□□□ 0.92
RBFOX1-222ENST00000585867 GREB1LQ9C091 1923 aaPredicted RBP20.82■□□□□ 0.92
RBFOX1-222ENST00000585867 TNKSO95271 1327 aa20.81■□□□□ 0.92
RBFOX1-222ENST00000585867 EEF2P13639 858 aaKnown RBP20.81■□□□□ 0.92
RBFOX1-222ENST00000585867 ATP2B2Q01814 1243 aa20.81■□□□□ 0.92
RBFOX1-222ENST00000585867 SCRN1Q12765 414 aa20.81■□□□□ 0.92
RBFOX1-222ENST00000585867 DEFB115Q30KQ5 88 aa20.81■□□□□ 0.92
RBFOX1-222ENST00000585867 SIAH1Q8IUQ4 282 aa20.81■□□□□ 0.92
RBFOX1-222ENST00000585867 WNK4Q96J92 1243 aa20.81■□□□□ 0.92
RBFOX1-222ENST00000585867 GPHNQ9NQX3 736 aaPredicted RBP20.81■□□□□ 0.92
RBFOX1-222ENST00000585867 KIF3AQ9Y496 699 aa20.81■□□□□ 0.92
RBFOX1-222ENST00000585867 PDCP20941 246 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 GJB2P29033 226 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 HMGN5P82970 282 aaKnown RBP20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 SPP2Q13103 211 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 APOA5Q6Q788 366 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 PAXIP1Q6ZW49 1069 aaPredicted RBP20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 ZNF280CQ8ND82 737 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 WDR18Q9BV38 432 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 NYAP2Q9P242 653 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 CLIP2Q9UDT6 1046 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 BRPF3Q9ULD4 1205 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 AFG3L2Q9Y4W6 797 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 SLC12A7Q9Y666 1083 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 RASSF10A6NK89 507 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 IRF6O14896 467 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 ZBTB43O43298 467 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 TTLL1O95922 423 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 GJA5P36382 358 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 HTRA3P83110 453 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 PPIL2Q13356 520 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 PPP4R3BQ5MIZ7 849 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 RASAL3Q86YV0 1011 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 ACER1Q8TDN7 264 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 CCDC102AQ96A19 550 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 ARHGEF10LQ9HCE6 1279 aa20.8■□□□□ 0.92
RBFOX1-222ENST00000585867 NID2Q14112 1375 aa20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 TRIM75PA6NK02 468 aa20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 HSPA6P17066 643 aa20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 ECE1P42892 770 aa20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 METAP2P50579 478 aaKnown RBP eCLIP20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 MKRN3Q13064 507 aaKnown RBP20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 SEC23AQ15436 765 aa20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 IFIT1BQ5T764 474 aaKnown RBP20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 SPRYD7Q5W111 196 aa20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 CPLX2Q6PUV4 134 aaKnown RBP20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 DGKHQ86XP1 1220 aa20.79■□□□□ 0.92
RBFOX1-222ENST00000585867 PHIPQ8WWQ0 1821 aa20.78■□□□□ 0.92
RBFOX1-222ENST00000585867 A0A1W2PRG0 241 aa20.78■□□□□ 0.92
RBFOX1-222ENST00000585867 CDKL5O76039 1030 aa20.78■□□□□ 0.92
RBFOX1-222ENST00000585867 NOVP48745 357 aa20.78■□□□□ 0.92
RBFOX1-222ENST00000585867 PPP2R5BQ15173 497 aa20.78■□□□□ 0.92
RBFOX1-222ENST00000585867 RCSD1Q6JBY9 416 aa20.78■□□□□ 0.92
RBFOX1-222ENST00000585867 CYP4F22Q6NT55 531 aa20.78■□□□□ 0.92
RBFOX1-222ENST00000585867 ENAHQ8N8S7 591 aaPredicted RBP20.78■□□□□ 0.92
RBFOX1-222ENST00000585867 WDR33Q9C0J8 1336 aaKnown RBP20.78■□□□□ 0.92
RBFOX1-222ENST00000585867 USP17L10C9JJH3 530 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 CPLX1O14810 134 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 SLC10A3P09131 477 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 CALM1P0DP23 149 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 CALM2P0DP24 149 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 CALM3P0DP25 149 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 ZBTB48P10074 688 aaPredicted RBP20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 CCT2P78371 535 aaKnown RBP20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 GRM1Q13255 1194 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 SMARCC2Q8TAQ2 1214 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 MKL1Q969V6 931 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 FEZ1Q99689 392 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 HPS5Q9UPZ3 1129 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 TMX2Q9Y320 296 aa20.77■□□□□ 0.92
RBFOX1-222ENST00000585867 GOLGA8AA7E2F4 631 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 FAM155AB1AL88 458 aaPredicted RBP20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 CXCL11O14625 94 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 CATIPQ7Z7H3 387 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 ANKS1AQ92625 1134 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 SH2D4AQ9H788 454 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 KCNH4Q9UQ05 1017 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 CCDC196A0A1B0GTZ2 297 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 TOP1P11387 765 aaKnown RBP20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 BACE1P56817 501 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 MTMR2Q13614 643 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 ZYXQ15942 572 aaKnown RBP20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 ZNF654Q8IZM8 581 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 FAM184AQ8NB25 1140 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 NSUN7Q8NE18 718 aaKnown RBP20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 GBP4Q96PP9 640 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 TMEM47Q9BQJ4 181 aa20.76■□□□□ 0.91
RBFOX1-222ENST00000585867 KIAA1683Q9H0B3 1180 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms