RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 KCNK3O14649 394 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 EXOC3O60645 756 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 TYW1Q9NV66 732 aaKnown RBP14.4□□□□□ -0.1
RNF43-208ENST00000584437 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.4□□□□□ -0.1
RNF43-208ENST00000584437 PPP1R13BQ96KQ4 1090 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 NLRC4Q9NPP4 1024 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 TCOF1Q13428 1488 aaKnown RBP14.4□□□□□ -0.1
RNF43-208ENST00000584437 A0A087WUV0 522 aaPredicted RBP14.4□□□□□ -0.1
RNF43-208ENST00000584437 A0A1W2PQ27 194 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 A0A1W2PQ64 194 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 A0A1W2PQD8 194 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 CCT5P48643 541 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 LRCH2Q5VUJ6 765 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 DYMQ7RTS9 669 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 NOSTRINQ8IVI9 506 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 TEX11Q8IYF3 940 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 VEZTQ9HBM0 779 aa14.4□□□□□ -0.1
RNF43-208ENST00000584437 EVI5O60447 810 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 TRIM37O94972 964 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 BLZF1Q9H2G9 400 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 KCNJ14Q9UNX9 436 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 LRRD1A4D1F6 860 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 CCDC89Q8N998 374 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 KIAA0232Q92628 1395 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 TNRQ92752 1358 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 GSPT1P15170 499 aaKnown RBP14.39□□□□□ -0.11
RNF43-208ENST00000584437 STRN3Q13033 797 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 RPAINQ86UA6 219 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 RIC8AQ9NPQ8 531 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 EPN1Q9Y6I3 576 aaPredicted RBP14.39□□□□□ -0.11
RNF43-208ENST00000584437 FAM135BQ49AJ0 1406 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 ABCC4O15439 1325 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 LSM14BQ9BX40 385 aaKnown RBP14.39□□□□□ -0.11
RNF43-208ENST00000584437 GPCPD1Q9NPB8 672 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 TRIM68Q6AZZ1 485 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 CCDC13Q8IYE1 715 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 EXOC4Q96A65 974 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 FANCLQ9NW38 375 aa14.39□□□□□ -0.11
RNF43-208ENST00000584437 KDM3AQ9Y4C1 1321 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 SH3BP5O60239 455 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 IL13P35225 146 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 SPATS2LQ9NUQ6 558 aaKnown RBP14.38□□□□□ -0.11
RNF43-208ENST00000584437 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.38□□□□□ -0.11
RNF43-208ENST00000584437 SUN1O94901 812 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 MYCNP04198 464 aaPredicted RBP14.38□□□□□ -0.11
RNF43-208ENST00000584437 CLTAP09496 248 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 ITGA6P23229 1130 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 RBBP5Q15291 538 aaKnown RBP14.38□□□□□ -0.11
RNF43-208ENST00000584437 NCAPH2Q6IBW4 605 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 BBOF1Q8ND07 529 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 U2AF1L4Q8WU68 220 aaKnown RBP14.38□□□□□ -0.11
RNF43-208ENST00000584437 ARMC9Q7Z3E5 817 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 PPP4R1Q8TF05 950 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 USTQ9Y2C2 406 aa14.38□□□□□ -0.11
RNF43-208ENST00000584437 LRRC59Q96AG4 307 aaKnown RBP14.38□□□□□ -0.11
RNF43-208ENST00000584437 GTPBP6O43824 516 aaPredicted RBP14.37□□□□□ -0.11
RNF43-208ENST00000584437 IL2RBP14784 551 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 HOXC9P31274 260 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 HSP90AA5PQ58FG0 334 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 NELFCDQ8IXH7 590 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 CCDC197Q8NCU1 140 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 RUNDC3BQ96NL0 473 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 MYL10Q9BUA6 226 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 CCDC151A5D8V7 595 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 OPHN1O60890 802 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 MYCT1Q8N699 235 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 STAMQ92783 540 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 PCDHA7Q9UN72 937 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 TRPM2O94759 1503 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 USP19O94966 1318 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 UHRF1BP1LA0JNW5 1464 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 GCNT3O95395 438 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 XRCC5P13010 732 aaKnown RBP14.37□□□□□ -0.11
RNF43-208ENST00000584437 EPHB4P54760 987 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 PARP10Q53GL7 1025 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 MYOCDQ8IZQ8 938 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 IP6K1Q92551 441 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 SUCLG2Q96I99 432 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 MRPL44Q9H9J2 332 aaKnown RBP14.37□□□□□ -0.11
RNF43-208ENST00000584437 ARHGAP42A6NI28 874 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 IKBKBO14920 756 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 DAPK3O43293 454 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 LPIN2Q92539 896 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 EYA3Q99504 573 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 KCNG1Q9UIX4 513 aa14.37□□□□□ -0.11
RNF43-208ENST00000584437 CHMP2AO43633 222 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 PALM2Q8IXS6 379 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 DDX27Q96GQ7 796 aaKnown RBP14.36□□□□□ -0.11
RNF43-208ENST00000584437 NSFL1CQ9UNZ2 370 aaKnown RBP14.36□□□□□ -0.11
RNF43-208ENST00000584437 TRAPPC8Q9Y2L5 1435 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 KRT12Q99456 494 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 TRIM4Q9C037 500 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 EFCC1Q9HA90 598 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 TPCN1Q9ULQ1 816 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 MAP3K19Q56UN5 1328 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 RASIP1Q5U651 963 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 NGLY1Q96IV0 654 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 IWS1Q96ST2 819 aa14.36□□□□□ -0.11
RNF43-208ENST00000584437 RNASELQ05823 741 aaKnown RBP14.36□□□□□ -0.11
RNF43-208ENST00000584437 SF3A3Q12874 501 aaKnown RBP eCLIP14.36□□□□□ -0.119e-18■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms