RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 HMGB1P09429 215 aaKnown RBP8.28□□□□□ -1.08
TTC39C-208ENST00000584095 UVSSAQ2YD98 709 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 TKFCQ3LXA3 575 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 SV2CQ496J9 727 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 NBPF12Q5TAG4 269 aaPredicted RBP8.28□□□□□ -1.08
TTC39C-208ENST00000584095 HEATR6Q6AI08 1181 aaKnown RBP8.28□□□□□ -1.08
TTC39C-208ENST00000584095 SEZ6L2Q6UXD5 910 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 C16orf86Q6ZW13 317 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 CDH24Q86UP0 819 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 DZIP1LQ8IYY4 767 aaKnown RBP8.28□□□□□ -1.08
TTC39C-208ENST00000584095 LRRC47Q8N1G4 583 aaKnown RBP8.28□□□□□ -1.08
TTC39C-208ENST00000584095 ARMC10Q8N2F6 343 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 UTP4Q969X6 686 aaKnown RBP8.28□□□□□ -1.08
TTC39C-208ENST00000584095 VWCEQ96DN2 955 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 YIPF2Q9BWQ6 316 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 APEX2Q9UBZ4 518 aa8.28□□□□□ -1.08
TTC39C-208ENST00000584095 IQCA1LA6NCM1 817 aa8.27□□□□□ -1.09
TTC39C-208ENST00000584095 RBAK-RBAKDNI3L0D1 243 aa8.27□□□□□ -1.09
TTC39C-208ENST00000584095 NAT2P11245 290 aa8.27□□□□□ -1.09
TTC39C-208ENST00000584095 CDK5R2Q13319 367 aa8.27□□□□□ -1.09
TTC39C-208ENST00000584095 ZNF513Q8N8E2 541 aaPredicted RBP8.27□□□□□ -1.09
TTC39C-208ENST00000584095 ZBTB38Q8NAP3 1195 aaPredicted RBP8.27□□□□□ -1.09
TTC39C-208ENST00000584095 SCARF2Q96GP6 870 aaPredicted RBP8.27□□□□□ -1.09
TTC39C-208ENST00000584095 SGSM3Q96HU1 749 aa8.27□□□□□ -1.09
TTC39C-208ENST00000584095 GPATCH3Q96I76 525 aa8.27□□□□□ -1.09
TTC39C-208ENST00000584095 MYRFLQ96LU7 910 aa8.27□□□□□ -1.09
TTC39C-208ENST00000584095 FGD4Q96M96 766 aa8.27□□□□□ -1.09
TTC39C-208ENST00000584095 MKRN2Q9H000 416 aaKnown RBP8.27□□□□□ -1.09
TTC39C-208ENST00000584095 PRDM10Q9NQV6 1147 aa8.27□□□□□ -1.09
TTC39C-208ENST00000584095 A0A1W2PQU0 124 aa8.26□□□□□ -1.09
TTC39C-208ENST00000584095 PPM1GO15355 546 aaPredicted RBP8.26□□□□□ -1.09
TTC39C-208ENST00000584095 BMP3P12645 472 aa8.26□□□□□ -1.09
TTC39C-208ENST00000584095 MAP4P27816 1152 aaKnown RBP8.26□□□□□ -1.09
TTC39C-208ENST00000584095 MAP7Q14244 749 aa8.26□□□□□ -1.09
TTC39C-208ENST00000584095 TMEM67Q5HYA8 995 aa8.26□□□□□ -1.09
TTC39C-208ENST00000584095 ZSWIM2Q8NEG5 633 aa8.26□□□□□ -1.09
TTC39C-208ENST00000584095 APBA2Q99767 749 aa8.26□□□□□ -1.09
TTC39C-208ENST00000584095 ARHGEF4Q9NR80 690 aa8.26□□□□□ -1.09
TTC39C-208ENST00000584095 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
TTC39C-208ENST00000584095 ZNF451Q9Y4E5 1061 aa8.26□□□□□ -1.09
TTC39C-208ENST00000584095 RXRBP28702 533 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 RNF4P78317 190 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 LONRF2Q1L5Z9 754 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 FOXB2Q5VYV0 432 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 FAM20CQ8IXL6 584 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 C7orf61Q8IZ16 206 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 TOP6BLQ8N6T0 577 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 RNF141Q8WVD5 230 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 FEZ1Q99689 392 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 LGR4Q9BXB1 951 aa8.25□□□□□ -1.09
TTC39C-208ENST00000584095 AGRPO00253 132 aa8.24□□□□□ -1.09
TTC39C-208ENST00000584095 ASMTLO95671 621 aa8.24□□□□□ -1.09
TTC39C-208ENST00000584095 ITGAVP06756 1048 aa8.24□□□□□ -1.09
TTC39C-208ENST00000584095 ETV3P41162 512 aa8.24□□□□□ -1.09
TTC39C-208ENST00000584095 AUHQ13825 339 aaKnown RBP8.24□□□□□ -1.09
TTC39C-208ENST00000584095 TXNRD3Q86VQ6 643 aa8.24□□□□□ -1.09
TTC39C-208ENST00000584095 ZNF227Q86WZ6 799 aa8.24□□□□□ -1.09
TTC39C-208ENST00000584095 ASPNQ9BXN1 380 aa8.24□□□□□ -1.09
TTC39C-208ENST00000584095 FAM95CA0A1B0GW59 222 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 PPP1R12AO14974 1030 aaPredicted RBP8.23□□□□□ -1.09
TTC39C-208ENST00000584095 EOMESO95936 686 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 CD247P20963 164 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 GYS2P54840 703 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 RNF187Q5TA31 235 aaPredicted RBP8.23□□□□□ -1.09
TTC39C-208ENST00000584095 YOD1Q5VVQ6 348 aaPredicted RBP8.23□□□□□ -1.09
TTC39C-208ENST00000584095 PPP1R14AQ96A00 147 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 EXOC2Q96KP1 924 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 FBXL18Q96ME1 805 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 SLC26A8Q96RN1 970 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 GBP3Q9H0R5 595 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 SLKQ9H2G2 1235 aaPredicted RBP8.23□□□□□ -1.09
TTC39C-208ENST00000584095 GP6Q9HCN6 339 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 WHRNQ9P202 907 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 CD2APQ9Y5K6 639 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 CNTNAP4Q9C0A0 1308 aa8.23□□□□□ -1.09
TTC39C-208ENST00000584095 LEFTY1O75610 366 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 PPP2R2AP63151 447 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 TCEA2Q15560 299 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 PTPROQ16827 1216 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 FILIP1Q7Z7B0 1213 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 ALYREFQ86V81 257 aaKnown RBP8.22□□□□□ -1.09
TTC39C-208ENST00000584095 ANKRD13AQ8IZ07 590 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 LRRN4CLQ8ND94 238 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 DUSP23Q9BVJ7 150 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 KCNF1Q9H3M0 494 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 CWC22Q9HCG8 908 aaKnown RBP8.22□□□□□ -1.09
TTC39C-208ENST00000584095 LRP2BPQ9P2M1 347 aa8.22□□□□□ -1.09
TTC39C-208ENST00000584095 TBX1O43435 398 aa8.21□□□□□ -1.1
TTC39C-208ENST00000584095 LRRN2O75325 713 aa8.21□□□□□ -1.1
TTC39C-208ENST00000584095 CAPNS1P04632 268 aa8.21□□□□□ -1.1
TTC39C-208ENST00000584095 L1CAMP32004 1257 aa8.21□□□□□ -1.1
TTC39C-208ENST00000584095 INSM1Q01101 510 aaPredicted RBP8.21□□□□□ -1.1
TTC39C-208ENST00000584095 SNW1Q13573 536 aaKnown RBP8.21□□□□□ -1.1
TTC39C-208ENST00000584095 NFKBIBQ15653 356 aa8.21□□□□□ -1.1
TTC39C-208ENST00000584095 NBPF9Q3BBW0 867 aa8.21□□□□□ -1.1
TTC39C-208ENST00000584095 ZC3H12BQ5HYM0 836 aaKnown RBP8.21□□□□□ -1.1
TTC39C-208ENST00000584095 PAOXQ6QHF9 649 aa8.21□□□□□ -1.1
TTC39C-208ENST00000584095 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
TTC39C-208ENST00000584095 ADAT2Q7Z6V5 191 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms