RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 MDM2Q00987 491 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-214ENST00000582981 LRCH2Q5VUJ6 765 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 SRGAP1Q7Z6B7 1085 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 CTNND2Q9UQB3 1225 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-214ENST00000582981 EBAG9O00559 213 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 FXR1P51114 621 aaKnown RBP eCLIP11.86□□□□□ -0.51
TOP3A-214ENST00000582981 ATP2B2Q01814 1243 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 AKAP17AQ02040 695 aaKnown RBP11.86□□□□□ -0.51
TOP3A-214ENST00000582981 AKNAD1Q5T1N1 836 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
TOP3A-214ENST00000582981 ACBD3Q9H3P7 528 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 SLC24A3Q9HC58 644 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 TAB2Q9NYJ8 693 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 USP54Q70EL1 1684 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 TCRBV5S4A2TA0A5A2 114 aa11.86□□□□□ -0.51
TOP3A-214ENST00000582981 LRRIQ3A6PVS8 624 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-214ENST00000582981 TTC19Q6DKK2 380 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-214ENST00000582981 ENC1O14682 589 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 PTPREP23469 700 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 DYNLL1P63167 89 aaKnown RBP11.85□□□□□ -0.51
TOP3A-214ENST00000582981 MRPS25P82663 173 aaKnown RBP11.85□□□□□ -0.51
TOP3A-214ENST00000582981 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 KIFC2Q96AC6 838 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 UBAC1Q9BSL1 405 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 ERICH2A1L162 156 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 ACTN4O43707 911 aaKnown RBP11.85□□□□□ -0.51
TOP3A-214ENST00000582981 ZMYND10O75800 440 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 FMNL1O95466 1100 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-214ENST00000582981 CPP00450 1065 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 CSF1RP07333 972 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 INPP5BP32019 993 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 KCNQ4P56696 695 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 FKBP15Q5T1M5 1219 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 KCNV1Q6PIU1 500 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 RASGRP4Q8TDF6 673 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 SLF1Q9BQI6 1058 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 CENPHQ9H3R5 247 aa11.85□□□□□ -0.51
TOP3A-214ENST00000582981 BCCIPQ9P287 314 aaKnown RBP eCLIP11.85□□□□□ -0.51
TOP3A-214ENST00000582981 RDXP35241 583 aaKnown RBP11.84□□□□□ -0.51
TOP3A-214ENST00000582981 GIGYF2Q6Y7W6 1299 aaKnown RBP11.84□□□□□ -0.51
TOP3A-214ENST00000582981 PPFIBP1Q86W92 1011 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 SLC35F6Q8N357 371 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 VGLL2Q8N8G2 317 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 TMEM87BQ96K49 555 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 EHD4Q9H223 541 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 CAPN7Q9Y6W3 813 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 TNKSO95271 1327 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 AKR1B15C9JRZ8 316 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-214ENST00000582981 NEBLO76041 1014 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 ZNF18P17022 549 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 CYP7A1P22680 504 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 GYG1P46976 350 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 MAP3K12Q12852 859 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 NCAPH2Q6IBW4 605 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.84□□□□□ -0.51
TOP3A-214ENST00000582981 WDR17Q8IZU2 1322 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 IFNAR1P17181 557 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 TBX2Q13207 712 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-214ENST00000582981 MORC3Q14149 939 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 FAM47AQ5JRC9 791 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-214ENST00000582981 FANCBQ8NB91 859 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 FAM107BQ9H098 131 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
TOP3A-214ENST00000582981 FRMD3A2A2Y4 597 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 TRIM49BA6NDI0 452 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 GOLGA6L9A6NEM1 432 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 MCM7P33993 719 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 UBE3CQ15386 1083 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 DZIP3Q86Y13 1208 aaKnown RBP11.83□□□□□ -0.52
TOP3A-214ENST00000582981 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-214ENST00000582981 FBXL16Q8N461 479 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 HDAC6Q9UBN7 1215 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-214ENST00000582981 ERVV-2B6SEH9 535 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 CCDC175P0C221 793 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 PPARDQ03181 441 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 TJP1Q07157 1748 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 KCTD19Q17RG1 926 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-214ENST00000582981 SLC51AQ86UW1 340 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 EGFL6Q8IUX8 553 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 BCAS4Q8TDM0 211 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 HNRNPLLQ8WVV9 542 aaKnown RBP11.83□□□□□ -0.52
TOP3A-214ENST00000582981 CAPZA3Q96KX2 299 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.83□□□□□ -0.52
TOP3A-214ENST00000582981 GDAQ9Y2T3 454 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
TOP3A-214ENST00000582981 PP2D1A8MPX8 630 aa11.82□□□□□ -0.52
TOP3A-214ENST00000582981 MYO1FO00160 1098 aa11.82□□□□□ -0.52
TOP3A-214ENST00000582981 KIF5CO60282 957 aa11.82□□□□□ -0.52
TOP3A-214ENST00000582981 SRGAP2O75044 1071 aa11.82□□□□□ -0.52
TOP3A-214ENST00000582981 STARD3NLO95772 234 aa11.82□□□□□ -0.52
TOP3A-214ENST00000582981 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
TOP3A-214ENST00000582981 GSPT2Q8IYD1 628 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms