RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 STK3Q13188 491 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 GRM4Q14833 912 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 RTN1Q16799 776 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 ARMC9Q7Z3E5 817 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 MICU3Q86XE3 530 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 CLEC10AQ8IUN9 316 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 CCDC83Q8IWF9 413 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 NECAB1Q8N987 351 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 WDR18Q9BV38 432 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 PICK1Q9NRD5 415 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 FAM217BQ9NTX9 383 aaPredicted RBP14.01□□□□□ -0.17
CCDC57-216ENST00000582885 NAP1L2Q9ULW6 460 aaPredicted RBP14.01□□□□□ -0.17
CCDC57-216ENST00000582885 TMX2Q9Y320 296 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 LOC285556D6RIA3 1793 aa14.01□□□□□ -0.17
CCDC57-216ENST00000582885 SMARCA1P28370 1054 aa14□□□□□ -0.17
CCDC57-216ENST00000582885 GNAQP50148 359 aa14□□□□□ -0.17
CCDC57-216ENST00000582885 CCT2P78371 535 aaKnown RBP14□□□□□ -0.17
CCDC57-216ENST00000582885 LDLRAD1Q5T700 205 aa14□□□□□ -0.17
CCDC57-216ENST00000582885 CPLX2Q6PUV4 134 aaKnown RBP14□□□□□ -0.17
CCDC57-216ENST00000582885 PPP1R3FQ6ZSY5 799 aaPredicted RBP14□□□□□ -0.17
CCDC57-216ENST00000582885 ANKRD13AQ8IZ07 590 aa14□□□□□ -0.17
CCDC57-216ENST00000582885 CTCFLQ8NI51 663 aaPredicted RBP14□□□□□ -0.17
CCDC57-216ENST00000582885 ZKSCAN4Q969J2 545 aaPredicted RBP14□□□□□ -0.17
CCDC57-216ENST00000582885 MYL10Q9BUA6 226 aa14□□□□□ -0.17
CCDC57-216ENST00000582885 AS3MTQ9HBK9 375 aa14□□□□□ -0.17
CCDC57-216ENST00000582885 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
CCDC57-216ENST00000582885 CSADQ9Y600 493 aa14□□□□□ -0.17
CCDC57-216ENST00000582885 A0A1W2PRG0 241 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 PALM3A6NDB9 673 aaPredicted RBP13.99□□□□□ -0.17
CCDC57-216ENST00000582885 TRAF5O00463 557 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 KIF3CO14782 793 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 CDKL5O76039 1030 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 PDHBP11177 359 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 IFNAR1P17181 557 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 PTPRAP18433 802 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 CDC27P30260 824 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 SLC4A3P48751 1232 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 ATP2B2Q01814 1243 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 NTRK3Q16288 839 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
CCDC57-216ENST00000582885 SMARCC2Q8TAQ2 1214 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 NUP133Q8WUM0 1156 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 DCAF4Q8WV16 495 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 GMCL1Q96IK5 515 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 LZTS2Q9BRK4 669 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 KIAA1683Q9H0B3 1180 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 NCOA5Q9HCD5 579 aaKnown RBP13.99□□□□□ -0.17
CCDC57-216ENST00000582885 GOPCQ9HD26 462 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 SNCAIPQ9Y6H5 919 aa13.99□□□□□ -0.17
CCDC57-216ENST00000582885 RLFQ13129 1914 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 F5H6K3 240 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 CPLX1O14810 134 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 CTDNEP1O95476 244 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 PARP1P09874 1014 aaKnown RBP13.98□□□□□ -0.17
CCDC57-216ENST00000582885 RXRAP19793 462 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 ADD1P35611 737 aaKnown RBP13.98□□□□□ -0.17
CCDC57-216ENST00000582885 HMGN5P82970 282 aaKnown RBP13.98□□□□□ -0.17
CCDC57-216ENST00000582885 KLRC3Q07444 240 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 PRKG1Q13976 671 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 VGLL4Q14135 290 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 GPATCH4Q5T3I0 446 aaKnown RBP13.98□□□□□ -0.17
CCDC57-216ENST00000582885 TMTC3Q6ZXV5 915 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 NSUN7Q8NE18 718 aaKnown RBP13.98□□□□□ -0.17
CCDC57-216ENST00000582885 ACER1Q8TDN7 264 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 VCPKMTQ9H867 229 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 MAD2L2Q9UI95 211 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 FZD1Q9UP38 647 aa13.98□□□□□ -0.17
CCDC57-216ENST00000582885 STK36Q9NRP7 1315 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 C19orf81C9J6K1 198 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 USP17L10C9JJH3 530 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 PDIA4P13667 645 aaKnown RBP13.97□□□□□ -0.17
CCDC57-216ENST00000582885 ECE1P42892 770 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 USP14P54578 494 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 ZNF543Q08ER8 600 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 TTLL12Q14166 644 aaPredicted RBP13.97□□□□□ -0.17
CCDC57-216ENST00000582885 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 RAB11FIP4Q86YS3 637 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 CCDC144CPQ8IYA2 1237 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 C2orf69Q8N8R5 385 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 LPAR1Q92633 364 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 GBA2Q9HCG7 927 aaPredicted RBP13.97□□□□□ -0.17
CCDC57-216ENST00000582885 SMC3Q9UQE7 1217 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 AFG3L2Q9Y4W6 797 aa13.97□□□□□ -0.17
CCDC57-216ENST00000582885 PASKQ96RG2 1323 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 MYH15Q9Y2K3 1946 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 SPDYE5A6NIY4 337 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 NDUFB10O96000 172 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 PPATQ06203 517 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 FUT2Q10981 343 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 NBPF11Q86T75 865 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 ERO1BQ86YB8 467 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 SMC1BQ8NDV3 1235 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 RGS22Q8NE09 1264 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 RBM46Q8TBY0 533 aaKnown RBP13.96□□□□□ -0.17
CCDC57-216ENST00000582885 SPZ1Q9BXG8 430 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 RNF26Q9BY78 433 aaPredicted RBP13.96□□□□□ -0.17
CCDC57-216ENST00000582885 RBM27Q9P2N5 1060 aaKnown RBP13.96□□□□□ -0.17
CCDC57-216ENST00000582885 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms