RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SOCS7O14512 581 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 MSNP26038 577 aaKnown RBP26.05■■□□□ 1.76
CCDC47-204ENST00000582252 PKN1Q16512 942 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 SLC4A8Q2Y0W8 1093 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 RCSD1Q6JBY9 416 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 PHF20Q9BVI0 1012 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 SAP30BPQ9UHR5 308 aaKnown RBP26.05■■□□□ 1.76
CCDC47-204ENST00000582252 SBF1O95248 1867 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 ADCY5O95622 1261 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 PNMA1Q8ND90 353 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 TIGD1Q96MW7 591 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 ANO10Q9NW15 660 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 DAGLAQ9Y4D2 1042 aa26.05■■□□□ 1.76
CCDC47-204ENST00000582252 F8W031 263 aaPredicted RBP26.04■■□□□ 1.76
CCDC47-204ENST00000582252 MARCKSP29966 332 aaPredicted RBP26.04■■□□□ 1.76
CCDC47-204ENST00000582252 CLCN1P35523 988 aa26.04■■□□□ 1.76
CCDC47-204ENST00000582252 RASSF7Q02833 373 aa26.04■■□□□ 1.76
CCDC47-204ENST00000582252 ZRSR1Q15695 479 aaKnown RBP26.04■■□□□ 1.76
CCDC47-204ENST00000582252 CBX8Q9HC52 389 aa26.04■■□□□ 1.76
CCDC47-204ENST00000582252 PLCD1P51178 756 aa26.03■■□□□ 1.76
CCDC47-204ENST00000582252 VPS54Q9P1Q0 977 aa26.03■■□□□ 1.76
CCDC47-204ENST00000582252 ADAMTSL1Q8N6G6 1762 aa26.03■■□□□ 1.76
CCDC47-204ENST00000582252 ZNF202O95125 648 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 PFKFB1P16118 471 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 RASA1P20936 1047 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 ZNF165P49910 485 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 HDLBPQ00341 1268 aaKnown RBP26.02■■□□□ 1.76
CCDC47-204ENST00000582252 RSBN1LQ6PCB5 846 aaPredicted RBP26.02■■□□□ 1.76
CCDC47-204ENST00000582252 HHIPL2Q6UWX4 724 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 SRBD1Q8N5C6 995 aaKnown RBP26.02■■□□□ 1.76
CCDC47-204ENST00000582252 KRI1Q8N9T8 703 aaKnown RBP26.02■■□□□ 1.76
CCDC47-204ENST00000582252 TEKT1Q969V4 418 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 MRIQ9BWK5 157 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 IL17RBQ9NRM6 502 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 NOL7Q9UMY1 257 aaKnown RBP26.02■■□□□ 1.76
CCDC47-204ENST00000582252 MORC2Q9Y6X9 1032 aaPredicted RBP26.02■■□□□ 1.76
CCDC47-204ENST00000582252 UTRNP46939 3433 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 FAM237AA0A1B0GTK4 181 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 WDHD1O75717 1129 aaPredicted RBP26.02■■□□□ 1.76
CCDC47-204ENST00000582252 RAD17O75943 681 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 VIL1P09327 827 aaKnown RBP26.02■■□□□ 1.76
CCDC47-204ENST00000582252 CDK8P49336 464 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 GRM4Q14833 912 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 KIAA0825Q8IV33 1275 aa26.02■■□□□ 1.76
CCDC47-204ENST00000582252 BMP15O95972 392 aa26.01■■□□□ 1.75
CCDC47-204ENST00000582252 SCG2P13521 617 aa26.01■■□□□ 1.75
CCDC47-204ENST00000582252 SYKP43405 635 aa26.01■■□□□ 1.75
CCDC47-204ENST00000582252 LZTS2Q9BRK4 669 aa26.01■■□□□ 1.75
CCDC47-204ENST00000582252 NAT10Q9H0A0 1025 aaKnown RBP26.01■■□□□ 1.75
CCDC47-204ENST00000582252 DNAJC25Q9H1X3 360 aa26.01■■□□□ 1.75
CCDC47-204ENST00000582252 PSMD14O00487 310 aa26■■□□□ 1.75
CCDC47-204ENST00000582252 PLCB2Q00722 1185 aa26■■□□□ 1.75
CCDC47-204ENST00000582252 NR5A1Q13285 461 aa26■■□□□ 1.75
CCDC47-204ENST00000582252 PFKFB3Q16875 520 aaPredicted RBP26■■□□□ 1.75
CCDC47-204ENST00000582252 RESP18Q5W5W9 173 aa26■■□□□ 1.75
CCDC47-204ENST00000582252 NEDD1Q8NHV4 660 aa26■■□□□ 1.75
CCDC47-204ENST00000582252 HPSEQ9Y251 543 aa26■■□□□ 1.75
CCDC47-204ENST00000582252 SCNN1DP51172 638 aa26■■□□□ 1.75
CCDC47-204ENST00000582252 ARHGAP27Q6ZUM4 889 aa26■■□□□ 1.75
CCDC47-204ENST00000582252 GOLGA6L19H0YKK7 550 aa25.99■■□□□ 1.75
CCDC47-204ENST00000582252 TOB1P50616 345 aaPredicted RBP25.99■■□□□ 1.75
CCDC47-204ENST00000582252 LUZP1Q86V48 1076 aa25.99■■□□□ 1.75
CCDC47-204ENST00000582252 SH3GLB2Q9NR46 395 aa25.99■■□□□ 1.75
CCDC47-204ENST00000582252 FAM13BQ9NYF5 915 aa25.99■■□□□ 1.75
CCDC47-204ENST00000582252 KIAA1468Q9P260 1216 aa25.99■■□□□ 1.75
CCDC47-204ENST00000582252 SERPINA10Q9UK55 444 aa25.99■■□□□ 1.75
CCDC47-204ENST00000582252 MYH8P13535 1937 aa25.98■■□□□ 1.75
CCDC47-204ENST00000582252 CALML3P27482 149 aa25.98■■□□□ 1.75
CCDC47-204ENST00000582252 CRKP46108 304 aa25.98■■□□□ 1.75
CCDC47-204ENST00000582252 CXCL9Q07325 125 aa25.98■■□□□ 1.75
CCDC47-204ENST00000582252 CIAPIN1Q6FI81 312 aa25.98■■□□□ 1.75
CCDC47-204ENST00000582252 CEP57L1Q8IYX8 460 aa25.98■■□□□ 1.75
CCDC47-204ENST00000582252 FAM177A1Q8N128 213 aaPredicted RBP25.98■■□□□ 1.75
CCDC47-204ENST00000582252 SLC44A5Q8NCS7 719 aa25.98■■□□□ 1.75
CCDC47-204ENST00000582252 CABP5Q9NP86 173 aa25.98■■□□□ 1.75
CCDC47-204ENST00000582252 TRIM75PA6NK02 468 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 TNIP1Q15025 636 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 SHC4Q6S5L8 630 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 ZNF579Q8NAF0 562 aaKnown RBP25.97■■□□□ 1.75
CCDC47-204ENST00000582252 AGBL3Q8NEM8 1001 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 OXER1Q8TDS5 423 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 ZDHHC15Q96MV8 337 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 STX8Q9UNK0 236 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 GOLGA6L6A8MZA4 724 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 PTPREP23469 700 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 NLRP5P59047 1200 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 GMLQ99445 158 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 TMEM47Q9BQJ4 181 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 HOOK1Q9UJC3 728 aaKnown RBP25.97■■□□□ 1.75
CCDC47-204ENST00000582252 ZKSCAN5Q9Y2L8 839 aa25.97■■□□□ 1.75
CCDC47-204ENST00000582252 TPM3P06753 285 aa25.96■■□□□ 1.75
CCDC47-204ENST00000582252 LMNB1P20700 586 aa25.96■■□□□ 1.75
CCDC47-204ENST00000582252 PLIN4Q96Q06 1357 aa25.96■■□□□ 1.75
CCDC47-204ENST00000582252 hCG_1642624A0A1W2PR95 340 aa25.95■■□□□ 1.74
CCDC47-204ENST00000582252 PRELPP51888 382 aa25.95■■□□□ 1.74
CCDC47-204ENST00000582252 SWAP70Q9UH65 585 aa25.95■■□□□ 1.74
CCDC47-204ENST00000582252 HDAC9Q9UKV0 1011 aa25.95■■□□□ 1.74
CCDC47-204ENST00000582252 FZD9O00144 591 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 TRAPPC10P48553 1259 aa25.94■■□□□ 1.74
CCDC47-204ENST00000582252 EIF6P56537 245 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms