RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 HYAL3O43820 417 aaPredicted RBP7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 LRRN2O75325 713 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 SPINK2P20155 84 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 RNF4P78317 190 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 TNK2Q07912 1038 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 ZYXQ15942 572 aaKnown RBP7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 PPP2R5EQ16537 467 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 UNC5AQ6ZN44 842 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 SPACA3Q8IXA5 215 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 Q96M66 194 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 FBXL18Q96ME1 805 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 SLC6A18Q96N87 628 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 KRTAP4-12Q9BQ66 201 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 TNKS2Q9H2K2 1166 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 KCNH3Q9ULD8 1083 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 SNX11Q9Y5W9 270 aa7.25□□□□□ -1.25
SMCHD1-204ENST00000581226 ARTNQ5T4W7 220 aa7.24□□□□□ -1.25
SMCHD1-204ENST00000581226 NBPF12Q5TAG4 269 aaPredicted RBP7.24□□□□□ -1.25
SMCHD1-204ENST00000581226 TTC6Q86TZ1 520 aa7.24□□□□□ -1.25
SMCHD1-204ENST00000581226 FAM169BQ8N8A8 192 aa7.24□□□□□ -1.25
SMCHD1-204ENST00000581226 PIWIL2Q8TC59 973 aaKnown RBP7.24□□□□□ -1.25
SMCHD1-204ENST00000581226 VWCEQ96DN2 955 aa7.24□□□□□ -1.25
SMCHD1-204ENST00000581226 ZNF512BQ96KM6 892 aaPredicted RBP7.24□□□□□ -1.25
SMCHD1-204ENST00000581226 HRASLS5Q96KN8 279 aa7.24□□□□□ -1.25
SMCHD1-204ENST00000581226 HSPA12BQ96MM6 686 aa7.24□□□□□ -1.25
SMCHD1-204ENST00000581226 A0A1W2PQH9 124 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 ETFBP38117 255 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 CLCN7P51798 805 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 PRKCQQ04759 706 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 AOC3Q16853 763 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 C19orf47Q8N9M1 422 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 DTWD2Q8NBA8 298 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 MISP3Q96FF7 219 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 TANGO6Q9C0B7 1094 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 MKRN2Q9H000 416 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 ZFP64Q9NPA5 681 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 SUCOQ9UBS9 1254 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 CCDC39Q9UFE4 941 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 VAV3Q9UKW4 847 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 ANGEL1Q9UNK9 670 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 ST14Q9Y5Y6 855 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 SLC12A7Q9Y666 1083 aa7.23□□□□□ -1.25
SMCHD1-204ENST00000581226 SMAD7O15105 426 aaKnown RBP7.22□□□□□ -1.25
SMCHD1-204ENST00000581226 PRNPP04156 253 aa7.22□□□□□ -1.25
SMCHD1-204ENST00000581226 BNIP3Q12983 259 aa7.22□□□□□ -1.25
SMCHD1-204ENST00000581226 NBPF11Q86T75 865 aa7.22□□□□□ -1.25
SMCHD1-204ENST00000581226 STK11IPQ8N1F8 1099 aa7.22□□□□□ -1.25
SMCHD1-204ENST00000581226 BCL7CQ8WUZ0 217 aaPredicted RBP7.22□□□□□ -1.25
SMCHD1-204ENST00000581226 ZNF408Q9H9D4 720 aa7.22□□□□□ -1.25
SMCHD1-204ENST00000581226 SLC5A6Q9Y289 635 aa7.22□□□□□ -1.25
SMCHD1-204ENST00000581226 LTBP3Q9NS15 1303 aa7.22□□□□□ -1.25
SMCHD1-204ENST00000581226 H3BS24 57 aa7.21□□□□□ -1.26
SMCHD1-204ENST00000581226 PMS1P54277 932 aaKnown RBP7.21□□□□□ -1.26
SMCHD1-204ENST00000581226 CASP7P55210 303 aa7.21□□□□□ -1.26
SMCHD1-204ENST00000581226 VSIG10LQ86VR7 867 aa7.21□□□□□ -1.26
SMCHD1-204ENST00000581226 CCDC144CPQ8IYA2 1237 aa7.21□□□□□ -1.26
SMCHD1-204ENST00000581226 ASB11Q8WXH4 323 aa7.21□□□□□ -1.26
SMCHD1-204ENST00000581226 UBE2FQ969M7 185 aa7.21□□□□□ -1.26
SMCHD1-204ENST00000581226 ZSWIM5Q9P217 1185 aa7.21□□□□□ -1.26
SMCHD1-204ENST00000581226 PRKAG3Q9UGI9 489 aa7.21□□□□□ -1.26
SMCHD1-204ENST00000581226 WNT11O96014 354 aa7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 TP53P04637 393 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 ATP2B1P20020 1258 aa7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 NBPF9Q3BBW0 867 aa7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 BBS9Q3SYG4 887 aa7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 TNNI3KQ59H18 835 aa7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 TDRD10Q5VZ19 366 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 THAP5Q7Z6K1 395 aa7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 FLCNQ8NFG4 579 aa7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 ASCC2Q9H1I8 757 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 TRIT1Q9H3H1 467 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 PHAXQ9H814 394 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 SEMA3GQ9NS98 782 aa7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 FAM86C1Q9NVL1 165 aa7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 ZNF214Q9UL59 606 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-204ENST00000581226 C9IYK1 514 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 ADAMTS4O75173 837 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 CD96P40200 585 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 GNPTABQ3T906 1256 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 GPR62Q9BZJ7 368 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 DUSP15Q9H1R2 295 aaPredicted RBP7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 ATP13A1Q9HD20 1204 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 GPATCH2Q9NW75 528 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 ACTR10Q9NZ32 417 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 PPP1R1BQ9UD71 204 aaPredicted RBP7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 FBXL21Q9UKT6 434 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 PCDHB10Q9UN67 800 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 R3HCC1Q9Y3T6 440 aaKnown RBP7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 PITPNM2Q9BZ72 1349 aa7.19□□□□□ -1.26
SMCHD1-204ENST00000581226 WASH4PA8MWX3 477 aa7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 STK10O94804 968 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 CD8BP10966 210 aa7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 GTF2F1P35269 517 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 SLC7A5Q01650 507 aa7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 NMIQ13287 307 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 AUHQ13825 339 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 CLEC16AQ2KHT3 1053 aa7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 LARP1BQ659C4 914 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 ZNF574Q6ZN55 896 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-204ENST00000581226 SPRED2Q7Z698 418 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms