RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 C16orf86Q6ZW13 317 aa15□□□□□ -0.01
SENP3-204ENST00000580997 PLEKHH3Q7Z736 793 aa15□□□□□ -0.01
SENP3-204ENST00000580997 TRMT44Q8IYL2 757 aaKnown RBP15□□□□□ -0.01
SENP3-204ENST00000580997 DDRGK1Q96HY6 314 aa15□□□□□ -0.01
SENP3-204ENST00000580997 HTATIP2Q9BUP3 242 aa15□□□□□ -0.01
SENP3-204ENST00000580997 HMX1Q9NP08 348 aaPredicted RBP15□□□□□ -0.01
SENP3-204ENST00000580997 HOXC10Q9NYD6 342 aa15□□□□□ -0.01
SENP3-204ENST00000580997 BTBD7Q9P203 1132 aa15□□□□□ -0.01
SENP3-204ENST00000580997 TMX2Q9Y320 296 aa15□□□□□ -0.01
SENP3-204ENST00000580997 PLXNB2O15031 1838 aa15□□□□□ -0.01
SENP3-204ENST00000580997 RANBP2P49792 3224 aaKnown RBP15□□□□□ -0.01
SENP3-204ENST00000580997 CYP2D7A0A087X1C5 515 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 GSG1L2A8MUP6 293 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 AKR1B1P15121 316 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 CYP2B6P20813 491 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 RGS2P41220 211 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 SBK1Q52WX2 424 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 GIMAP6Q6P9H5 292 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 CCAR1Q8IX12 1150 aaKnown RBP14.99□□□□□ -0.01
SENP3-204ENST00000580997 AMOTL1Q8IY63 956 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 ANKLE1Q8NAG6 615 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 LPAR1Q92633 364 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 OSBP2Q969R2 916 aa14.99□□□□□ -0.01
SENP3-204ENST00000580997 TTC41PQ6P2S7 1318 aa14.98□□□□□ -0.01
SENP3-204ENST00000580997 RNF113AO15541 343 aaKnown RBP14.98□□□□□ -0.01
SENP3-204ENST00000580997 ZFYP08048 801 aaPredicted RBP14.98□□□□□ -0.01
SENP3-204ENST00000580997 RRP1P56182 461 aaKnown RBP14.98□□□□□ -0.01
SENP3-204ENST00000580997 KIAA1755Q5JYT7 1200 aa14.98□□□□□ -0.01
SENP3-204ENST00000580997 TSHZ3Q63HK5 1081 aa14.98□□□□□ -0.01
SENP3-204ENST00000580997 APPBP2Q92624 585 aa14.98□□□□□ -0.01
SENP3-204ENST00000580997 DPF3Q92784 378 aa14.98□□□□□ -0.01
SENP3-204ENST00000580997 ARHGEF10LQ9HCE6 1279 aa14.98□□□□□ -0.01
SENP3-204ENST00000580997 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
SENP3-204ENST00000580997 SLC15A5A6NIM6 579 aa14.97□□□□□ -0.01
SENP3-204ENST00000580997 GLRX3O76003 335 aaKnown RBP14.97□□□□□ -0.01
SENP3-204ENST00000580997 HOXC6P09630 235 aa14.97□□□□□ -0.01
SENP3-204ENST00000580997 PTPREP23469 700 aa14.97□□□□□ -0.01
SENP3-204ENST00000580997 ICA1Q05084 483 aa14.97□□□□□ -0.01
SENP3-204ENST00000580997 MAP2K5Q13163 448 aa14.97□□□□□ -0.01
SENP3-204ENST00000580997 PI4K2BQ8TCG2 481 aa14.97□□□□□ -0.01
SENP3-204ENST00000580997 APBA2Q99767 749 aa14.97□□□□□ -0.01
SENP3-204ENST00000580997 VCPKMTQ9H867 229 aa14.97□□□□□ -0.01
SENP3-204ENST00000580997 KANSL2Q9H9L4 492 aa14.97□□□□□ -0.01
SENP3-204ENST00000580997 COLQQ9Y215 455 aaPredicted RBP14.97□□□□□ -0.01
SENP3-204ENST00000580997 IGHA2P01877 340 aa14.96□□□□□ -0.01
SENP3-204ENST00000580997 ZKSCAN1P17029 563 aaPredicted RBP14.96□□□□□ -0.01
SENP3-204ENST00000580997 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
SENP3-204ENST00000580997 CACNB2Q08289 660 aaPredicted RBP14.96□□□□□ -0.01
SENP3-204ENST00000580997 GRB14Q14449 540 aa14.96□□□□□ -0.01
SENP3-204ENST00000580997 CCL14Q16627 93 aa14.96□□□□□ -0.01
SENP3-204ENST00000580997 MB21D1Q8N884 522 aa14.96□□□□□ -0.01
SENP3-204ENST00000580997 PAWRQ96IZ0 340 aaKnown RBP14.96□□□□□ -0.01
SENP3-204ENST00000580997 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.96□□□□□ -0.01
SENP3-204ENST00000580997 SH2D4AQ9H788 454 aa14.96□□□□□ -0.01
SENP3-204ENST00000580997 PCDH10Q9P2E7 1040 aa14.96□□□□□ -0.01
SENP3-204ENST00000580997 OGDHLQ9ULD0 1010 aa14.96□□□□□ -0.01
SENP3-204ENST00000580997 ERC2O15083 957 aa14.95□□□□□ -0.02
SENP3-204ENST00000580997 EEF2P13639 858 aaKnown RBP14.95□□□□□ -0.02
SENP3-204ENST00000580997 GNAT2P19087 354 aa14.95□□□□□ -0.02
SENP3-204ENST00000580997 LRRFIP1Q32MZ4 808 aaKnown RBP14.95□□□□□ -0.02
SENP3-204ENST00000580997 NECAB2Q7Z6G3 386 aa14.95□□□□□ -0.02
SENP3-204ENST00000580997 CLEC10AQ8IUN9 316 aa14.95□□□□□ -0.02
SENP3-204ENST00000580997 MOV10L1Q9BXT6 1211 aaKnown RBP14.95□□□□□ -0.02
SENP3-204ENST00000580997 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
SENP3-204ENST00000580997 ADAMTS5Q9UNA0 930 aa14.95□□□□□ -0.02
SENP3-204ENST00000580997 NR2E3Q9Y5X4 410 aa14.95□□□□□ -0.02
SENP3-204ENST00000580997 CEP290O15078 2479 aa14.95□□□□□ -0.02
SENP3-204ENST00000580997 MYH7P12883 1935 aa14.95□□□□□ -0.02
SENP3-204ENST00000580997 SALL3Q9BXA9 1300 aa14.94□□□□□ -0.02
SENP3-204ENST00000580997 BAZ2AQ9UIF9 1905 aaKnown RBP14.94□□□□□ -0.02
SENP3-204ENST00000580997 PATL2C9JE40 543 aaKnown RBP14.94□□□□□ -0.02
SENP3-204ENST00000580997 WDR46O15213 610 aaKnown RBP14.94□□□□□ -0.02
SENP3-204ENST00000580997 GPAA1O43292 621 aa14.94□□□□□ -0.02
SENP3-204ENST00000580997 STRNO43815 780 aa14.94□□□□□ -0.02
SENP3-204ENST00000580997 SPICE1Q8N0Z3 855 aa14.94□□□□□ -0.02
SENP3-204ENST00000580997 SHCBP1Q8NEM2 672 aa14.94□□□□□ -0.02
SENP3-204ENST00000580997 OTUD7AQ8TE49 926 aaPredicted RBP14.94□□□□□ -0.02
SENP3-204ENST00000580997 DIS3LQ8TF46 1054 aaKnown RBP14.94□□□□□ -0.02
SENP3-204ENST00000580997 NBPF3Q9H094 633 aa14.94□□□□□ -0.02
SENP3-204ENST00000580997 SPATC1LQ9H0A9 340 aa14.94□□□□□ -0.02
SENP3-204ENST00000580997 ROBO3Q96MS0 1386 aa14.94□□□□□ -0.02
SENP3-204ENST00000580997 M0R2C6 588 aa14.93□□□□□ -0.02
SENP3-204ENST00000580997 FLOT1O75955 427 aa14.93□□□□□ -0.02
SENP3-204ENST00000580997 RASA1P20936 1047 aa14.93□□□□□ -0.02
SENP3-204ENST00000580997 PRO3102Q9H379 93 aa14.93□□□□□ -0.02
SENP3-204ENST00000580997 CWC22Q9HCG8 908 aaKnown RBP14.93□□□□□ -0.02
SENP3-204ENST00000580997 EPB41L4AQ9HCS5 686 aaPredicted RBP14.93□□□□□ -0.02
SENP3-204ENST00000580997 FLRT1Q9NZU1 646 aa14.93□□□□□ -0.02
SENP3-204ENST00000580997 IVNS1ABPQ9Y6Y0 642 aa14.93□□□□□ -0.02
SENP3-204ENST00000580997 RLFQ13129 1914 aa14.93□□□□□ -0.02
SENP3-204ENST00000580997 SZT2Q5T011 3432 aa14.92□□□□□ -0.02
SENP3-204ENST00000580997 EVI5O60447 810 aa14.92□□□□□ -0.02
SENP3-204ENST00000580997 ERCC3P19447 782 aa14.92□□□□□ -0.02
SENP3-204ENST00000580997 MX1P20591 662 aa14.92□□□□□ -0.02
SENP3-204ENST00000580997 CCND3P30281 292 aaPredicted RBP14.92□□□□□ -0.02
SENP3-204ENST00000580997 FXR1P51114 621 aaKnown RBP eCLIP14.92□□□□□ -0.02
SENP3-204ENST00000580997 HDAC1Q13547 482 aaPredicted RBP14.92□□□□□ -0.02
SENP3-204ENST00000580997 WDR78Q5VTH9 848 aa14.92□□□□□ -0.02
SENP3-204ENST00000580997 IFNL3Q8IZI9 196 aa14.92□□□□□ -0.02
SENP3-204ENST00000580997 ABRAQ8N0Z2 381 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms