RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 BACE1P56817 501 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 SPP2Q13103 211 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 SEC23AQ15436 765 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 RCSD1Q6JBY9 416 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 PAXIP1Q6ZW49 1069 aaPredicted RBP13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 CTCFLQ8NI51 663 aaPredicted RBP13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 IGDCC4Q8TDY8 1250 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 WNK4Q96J92 1243 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 CLMNQ96JQ2 1002 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 ZSCAN31Q96LW9 406 aaPredicted RBP13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 MAP3K14Q99558 947 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 TMEM47Q9BQJ4 181 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 AGXT2Q9BYV1 514 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 LY9Q9HBG7 655 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 AFG3L2Q9Y4W6 797 aa13.74□□□□□ -0.21
SNORD3C-201ENST00000580533 MANSC4A6NHS7 340 aaPredicted RBP13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 RAD21O60216 631 aa13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 NMT2O60551 498 aa13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 CETPP11597 493 aa13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 GNAQP50148 359 aa13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 INHBEP58166 350 aa13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 MTMR2Q13614 643 aa13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 GPATCH4Q5T3I0 446 aaKnown RBP13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 PROCA1Q8NCQ7 364 aaPredicted RBP13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 BRF1Q92994 677 aa13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 VCPKMTQ9H867 229 aa13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 NAP1L2Q9ULW6 460 aaPredicted RBP13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 KCNH4Q9UQ05 1017 aa13.73□□□□□ -0.21
SNORD3C-201ENST00000580533 KLF18A0A0U1RQI7 1052 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 RASSF10A6NK89 507 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 WDR46O15213 610 aaKnown RBP13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 ZBTB43O43298 467 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 CPA1P15085 419 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 SLC1A4P43007 532 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 SREBF2Q12772 1141 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 DEFB115Q30KQ5 88 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 ASPRV1Q53RT3 343 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 SH3D19Q5HYK7 790 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 SPRYD7Q5W111 196 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 OTUD7BQ6GQQ9 843 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 CPLX2Q6PUV4 134 aaKnown RBP13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 ZNF654Q8IZM8 581 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 LRRC47Q8N1G4 583 aaKnown RBP13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 ZNF274Q96GC6 653 aaPredicted RBP13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 GMCL1Q96IK5 515 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 C12orf42Q96LP6 360 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 KIF2CQ99661 725 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 LZTS2Q9BRK4 669 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 LRRC2Q9BYS8 371 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 SH2B1Q9NRF2 756 aaPredicted RBP13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 RBM28Q9NW13 759 aaKnown RBP13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 ISY1Q9ULR0 285 aaKnown RBP13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 LIMCH1Q9UPQ0 1083 aa13.72□□□□□ -0.21
SNORD3C-201ENST00000580533 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 GOLGA8BA8MQT2 603 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 F5H6K3 240 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 IRF6O14896 467 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 SLC10A3P09131 477 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 PARP1P09874 1014 aaKnown RBP13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 METAP2P50579 478 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 AK2P54819 239 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 JAG1P78504 1218 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 KLRC3Q07444 240 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 NOGQ13253 232 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 APOA5Q6Q788 366 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 RASAL3Q86YV0 1011 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 HSCBQ8IWL3 235 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 NUP133Q8WUM0 1156 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 TCEANC2Q96MN5 208 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 PNMA3Q9UL41 463 aa13.71□□□□□ -0.21
SNORD3C-201ENST00000580533 CDKL5O76039 1030 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 BMP3P12645 472 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 HMGCS2P54868 508 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 EVCP57679 992 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 C1QTNF8P60827 252 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 BECN1Q14457 450 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 ZYXQ15942 572 aaKnown RBP13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 MICU3Q86XE3 530 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 CLEC10AQ8IUN9 316 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 ACER1Q8TDN7 264 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 CHURC1Q8WUH1 139 aa13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 SLKQ9H2G2 1235 aaPredicted RBP13.7□□□□□ -0.22
SNORD3C-201ENST00000580533 A0A1W2PRG0 241 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 GOLGA8AA7E2F4 631 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 CPLX1O14810 134 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 NDUFB10O96000 172 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 OSBPP22059 807 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 APOBRQ0VD83 1088 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 IKQ13123 557 aaPredicted RBP13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 TOB2Q14106 344 aaPredicted RBP13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 SHROOM1Q2M3G4 852 aaPredicted RBP13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 FAM160B2Q86V87 743 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms