RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 PNMA1Q8ND90 353 aa18.64■□□□□ 0.57
CSNK1D-212ENST00000580061 KIAA1683Q9H0B3 1180 aa18.64■□□□□ 0.57
CSNK1D-212ENST00000580061 CCDC69A6NI79 296 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 TRIM75PA6NK02 468 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 CXCL11O14625 94 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 ST18O60284 1047 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 EVCP57679 992 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 APOBRQ0VD83 1088 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 MTMR2Q13614 643 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 SPRYD7Q5W111 196 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 NFXL1Q6ZNB6 911 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 RASAL3Q86YV0 1011 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 FEZ1Q99689 392 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 BRPF3Q9ULD4 1205 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 KCNH4Q9UQ05 1017 aa18.63■□□□□ 0.57
CSNK1D-212ENST00000580061 C19orf81C9J6K1 198 aa18.62■□□□□ 0.57
CSNK1D-212ENST00000580061 F5H6K3 240 aa18.62■□□□□ 0.57
CSNK1D-212ENST00000580061 ZBTB48P10074 688 aaPredicted RBP18.62■□□□□ 0.57
CSNK1D-212ENST00000580061 KLRC3Q07444 240 aa18.62■□□□□ 0.57
CSNK1D-212ENST00000580061 SH3D19Q5HYK7 790 aa18.62■□□□□ 0.57
CSNK1D-212ENST00000580061 ZNF654Q8IZM8 581 aa18.62■□□□□ 0.57
CSNK1D-212ENST00000580061 GMCL1P1Q8NEA9 526 aa18.62■□□□□ 0.57
CSNK1D-212ENST00000580061 VCPKMTQ9H867 229 aa18.62■□□□□ 0.57
CSNK1D-212ENST00000580061 KLF18A0A0U1RQI7 1052 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 RASSF10A6NK89 507 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 SLC10A3P09131 477 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 USP14P54578 494 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 TROAPQ12815 778 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 DGKZQ13574 1117 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 ZYXQ15942 572 aaKnown RBP18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 KIAA1755Q5JYT7 1200 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 APOA5Q6Q788 366 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 USP17L2Q6R6M4 530 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 CATIPQ7Z7H3 387 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 C12orf42Q96LP6 360 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 LARP6Q9BRS8 491 aaKnown RBP18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 GOPCQ9HD26 462 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 SLC12A7Q9Y666 1083 aa18.61■□□□□ 0.57
CSNK1D-212ENST00000580061 A0A0G2JLL6 359 aaPredicted RBP18.6■□□□□ 0.57
CSNK1D-212ENST00000580061 FAM155AB1AL88 458 aaPredicted RBP18.6■□□□□ 0.57
CSNK1D-212ENST00000580061 CD2BP2O95400 341 aaKnown RBP18.6■□□□□ 0.57
CSNK1D-212ENST00000580061 NDUFB10O96000 172 aa18.6■□□□□ 0.57
CSNK1D-212ENST00000580061 SLFN13Q68D06 897 aa18.6■□□□□ 0.57
CSNK1D-212ENST00000580061 PRRT2Q7Z6L0 340 aaPredicted RBP18.6■□□□□ 0.57
CSNK1D-212ENST00000580061 CCDC102AQ96A19 550 aa18.6■□□□□ 0.57
CSNK1D-212ENST00000580061 EMILIN3Q9NT22 766 aa18.6■□□□□ 0.57
CSNK1D-212ENST00000580061 TPCN1Q9ULQ1 816 aa18.6■□□□□ 0.57
CSNK1D-212ENST00000580061 DDAH1O94760 285 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 SNHG28P0DPA3 235 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 PDHBP11177 359 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 HMGCS2P54868 508 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 C1QTNF8P60827 252 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 MKRN3Q13064 507 aaKnown RBP18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 DEFB115Q30KQ5 88 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 SYNE3Q6ZMZ3 975 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 RASGRP2Q7LDG7 609 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 LPAR1Q92633 364 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 ZNF274Q96GC6 653 aaPredicted RBP18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 GMCL1Q96IK5 515 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 MYL10Q9BUA6 226 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 MTMR7Q9Y216 660 aa18.59■□□□□ 0.57
CSNK1D-212ENST00000580061 PARP14Q460N5 1801 aa18.58■□□□□ 0.57
CSNK1D-212ENST00000580061 ZBTB43O43298 467 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 RAD21O60216 631 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 CALM1P0DP23 149 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 CALM2P0DP24 149 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 CALM3P0DP25 149 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 PDIA3P30101 505 aaKnown RBP18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 MCM2P49736 904 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 GTF2A2P52657 109 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 RCAN1P53805 252 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 CYP4F22Q6NT55 531 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 NOL8Q76FK4 1167 aaKnown RBP18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 MICU3Q86XE3 530 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 SPICE1Q8N0Z3 855 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 NUP133Q8WUM0 1156 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 DCAF4Q8WV16 495 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 MS4A4AQ96JQ5 239 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 MAP3K14Q99558 947 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 TMOD4Q9NZQ9 345 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 LIMCH1Q9UPQ0 1083 aa18.58■□□□□ 0.56
CSNK1D-212ENST00000580061 NID2Q14112 1375 aa18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 GOLGA8BA8MQT2 603 aa18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 VCAM1P19320 739 aa18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 RXRAP19793 462 aa18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 MOGSQ13724 837 aa18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 GRM4Q14833 912 aa18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 PAXIP1Q6ZW49 1069 aaPredicted RBP18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 RAB11FIP4Q86YS3 637 aa18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 PROCA1Q8NCQ7 364 aaPredicted RBP18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 NAP1L2Q9ULW6 460 aaPredicted RBP18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 HPS5Q9UPZ3 1129 aa18.57■□□□□ 0.56
CSNK1D-212ENST00000580061 WDR46O15213 610 aaKnown RBP18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 LARGE1O95461 756 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 CETPP11597 493 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 BMP3P12645 472 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 SLC1A4P43007 532 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 HTRA3P83110 453 aa18.56■□□□□ 0.56
CSNK1D-212ENST00000580061 ME3Q16798 604 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms