RNA–Protein interactions for RNA: ENST00000579944.1

LINC00271-206, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-206ENST00000579944 XYLT2Q9H1B5 865 aa6.41□□□□□ -1.38
LINC00271-206ENST00000579944 CWC22Q9HCG8 908 aaKnown RBP6.41□□□□□ -1.38
LINC00271-206ENST00000579944 GCM1Q9NP62 436 aa6.41□□□□□ -1.38
LINC00271-206ENST00000579944 CADPSQ9ULU8 1353 aa6.41□□□□□ -1.38
LINC00271-206ENST00000579944 RBAK-RBAKDNI3L0D1 243 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 ENC1O14682 589 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 LDHBP07195 334 aaKnown RBP6.4□□□□□ -1.38
LINC00271-206ENST00000579944 ADRB1P08588 477 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 TAGLNQ01995 201 aaKnown RBP6.4□□□□□ -1.38
LINC00271-206ENST00000579944 DSC3Q14574 896 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 INPP5AQ14642 412 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 SCARA3Q6AZY7 606 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 LRFN4Q6PJG9 635 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 OXR1Q8N573 874 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 PIWIL2Q8TC59 973 aaKnown RBP6.4□□□□□ -1.38
LINC00271-206ENST00000579944 INTS4Q96HW7 963 aaKnown RBP6.4□□□□□ -1.38
LINC00271-206ENST00000579944 SGPP1Q9BX95 441 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 WNT10AQ9GZT5 417 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 TMPRSS5Q9H3S3 457 aa6.4□□□□□ -1.38
LINC00271-206ENST00000579944 ZNF552Q9H707 407 aaPredicted RBP6.4□□□□□ -1.38
LINC00271-206ENST00000579944 PNMA6FA0A0J9YX94 578 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 FITM1A5D6W6 292 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 OTOL1A6NHN0 477 aaPredicted RBP6.39□□□□□ -1.39
LINC00271-206ENST00000579944 WASH4PA8MWX3 477 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 TPP2P29144 1249 aaPredicted RBP6.39□□□□□ -1.39
LINC00271-206ENST00000579944 PDE6BP35913 854 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 ETF1P62495 437 aaKnown RBP6.39□□□□□ -1.39
LINC00271-206ENST00000579944 SSPNQ14714 243 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 TIGD5Q53EQ6 642 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 C3orf58Q8NDZ4 430 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 XAGE3Q8WTP9 111 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 CEP44Q9C0F1 390 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 CLASP1Q7Z460 1538 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 HECW2Q9P2P5 1572 aa6.39□□□□□ -1.39
LINC00271-206ENST00000579944 ZGLP1P0C6A0 271 aa6.38□□□□□ -1.39
LINC00271-206ENST00000579944 XPCQ01831 940 aaPredicted RBP6.38□□□□□ -1.39
LINC00271-206ENST00000579944 RASIP1Q5U651 963 aa6.38□□□□□ -1.39
LINC00271-206ENST00000579944 PRAMEF13Q5VWM6 474 aa6.38□□□□□ -1.39
LINC00271-206ENST00000579944 HDXQ7Z353 690 aa6.38□□□□□ -1.39
LINC00271-206ENST00000579944 HID1Q8IV36 788 aa6.38□□□□□ -1.39
LINC00271-206ENST00000579944 PLPPR2Q96GM1 343 aa6.38□□□□□ -1.39
LINC00271-206ENST00000579944 YBX2Q9Y2T7 364 aaKnown RBP6.38□□□□□ -1.39
LINC00271-206ENST00000579944 PRDM2Q13029 1718 aa6.37□□□□□ -1.39
LINC00271-206ENST00000579944 PRPF40AO75400 957 aaKnown RBP6.37□□□□□ -1.39
LINC00271-206ENST00000579944 CST3P01034 146 aaPredicted RBP6.37□□□□□ -1.39
LINC00271-206ENST00000579944 NR0B2Q15466 257 aa6.37□□□□□ -1.39
LINC00271-206ENST00000579944 ENOX2Q16206 610 aaKnown RBP6.37□□□□□ -1.39
LINC00271-206ENST00000579944 CDH24Q86UP0 819 aa6.37□□□□□ -1.39
LINC00271-206ENST00000579944 TRIT1Q9H3H1 467 aaKnown RBP6.37□□□□□ -1.39
LINC00271-206ENST00000579944 KIAA1522Q9P206 1035 aaPredicted RBP6.37□□□□□ -1.39
LINC00271-206ENST00000579944 CYP8B1Q9UNU6 501 aa6.37□□□□□ -1.39
LINC00271-206ENST00000579944 FANCD2Q9BXW9 1451 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 FBXO24O75426 580 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 PI3P19957 117 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 GSTT1P30711 240 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 EGR3Q06889 387 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 GAB4Q2WGN9 574 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.36□□□□□ -1.39
LINC00271-206ENST00000579944 ALG1LQ6GMV1 187 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 SETDB2Q96T68 719 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 DUSP9Q99956 384 aaKnown RBP6.36□□□□□ -1.39
LINC00271-206ENST00000579944 MRS2Q9HD23 443 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 DUSP13Q9UII6 198 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 WWC3Q9ULE0 1092 aa6.36□□□□□ -1.39
LINC00271-206ENST00000579944 ITGAEP38570 1179 aa6.35□□□□□ -1.39
LINC00271-206ENST00000579944 FEZF2Q8TBJ5 459 aa6.35□□□□□ -1.39
LINC00271-206ENST00000579944 DHX38Q92620 1227 aaKnown RBP6.35□□□□□ -1.39
LINC00271-206ENST00000579944 SYTL4Q96C24 671 aaPredicted RBP6.35□□□□□ -1.39
LINC00271-206ENST00000579944 DUSP15Q9H1R2 295 aaPredicted RBP6.35□□□□□ -1.39
LINC00271-206ENST00000579944 GPR160Q9UJ42 338 aa6.35□□□□□ -1.39
LINC00271-206ENST00000579944 PPM1HQ9ULR3 514 aa6.35□□□□□ -1.39
LINC00271-206ENST00000579944 IRAK3Q9Y616 596 aa6.35□□□□□ -1.39
LINC00271-206ENST00000579944 LMTK3Q96Q04 1460 aa6.34□□□□□ -1.39
LINC00271-206ENST00000579944 AFF3P51826 1226 aaKnown RBP6.34□□□□□ -1.39
LINC00271-206ENST00000579944 PSMD2Q13200 908 aa6.34□□□□□ -1.39
LINC00271-206ENST00000579944 PCNX4Q63HM2 1172 aa6.34□□□□□ -1.39
LINC00271-206ENST00000579944 PANK1Q8TE04 598 aa6.34□□□□□ -1.39
LINC00271-206ENST00000579944 SIGLEC10Q96LC7 697 aa6.34□□□□□ -1.39
LINC00271-206ENST00000579944 Q96M66 194 aa6.34□□□□□ -1.39
LINC00271-206ENST00000579944 FAM161BQ96MY7 647 aa6.34□□□□□ -1.39
LINC00271-206ENST00000579944 PARP2Q9UGN5 583 aa6.34□□□□□ -1.39
LINC00271-206ENST00000579944 ETV3P41162 512 aa6.33□□□□□ -1.4
LINC00271-206ENST00000579944 PTPN11Q06124 597 aaPredicted RBP6.33□□□□□ -1.4
LINC00271-206ENST00000579944 ZXDCQ2QGD7 858 aaPredicted RBP6.33□□□□□ -1.4
LINC00271-206ENST00000579944 TSNAXIP1Q2TAA8 658 aa6.33□□□□□ -1.4
LINC00271-206ENST00000579944 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
LINC00271-206ENST00000579944 SPPL2CQ8IUH8 684 aa6.33□□□□□ -1.4
LINC00271-206ENST00000579944 FBF1Q8TES7 1133 aa6.33□□□□□ -1.4
LINC00271-206ENST00000579944 DACT3Q96B18 629 aaPredicted RBP6.33□□□□□ -1.4
LINC00271-206ENST00000579944 GPATCH2Q9NW75 528 aa6.33□□□□□ -1.4
LINC00271-206ENST00000579944 SNCAIPQ9Y6H5 919 aa6.33□□□□□ -1.4
LINC00271-206ENST00000579944 SLC22A31A6NKX4 558 aa6.32□□□□□ -1.4
LINC00271-206ENST00000579944 VAMP1P23763 118 aa6.32□□□□□ -1.4
LINC00271-206ENST00000579944 LTKP29376 864 aa6.32□□□□□ -1.4
LINC00271-206ENST00000579944 GRK4P32298 578 aa6.32□□□□□ -1.4
LINC00271-206ENST00000579944 CHRNEQ04844 493 aa6.32□□□□□ -1.4
LINC00271-206ENST00000579944 SNX17Q15036 470 aa6.32□□□□□ -1.4
LINC00271-206ENST00000579944 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.32□□□□□ -1.4
LINC00271-206ENST00000579944 ZDHHC14Q8IZN3 488 aa6.32□□□□□ -1.4
LINC00271-206ENST00000579944 VTI1BQ9UEU0 232 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms