RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 SIM2Q14190 667 aaPredicted RBP7.8□□□□□ -1.16
COPS3-216ENST00000579716 INO80DQ53TQ3 878 aaPredicted RBP7.8□□□□□ -1.16
COPS3-216ENST00000579716 LCE4AQ5TA78 99 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 PEAR1Q5VY43 1037 aaPredicted RBP7.8□□□□□ -1.16
COPS3-216ENST00000579716 STK11IPQ8N1F8 1099 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 KIAA1958Q8N8K9 716 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 ACRBPQ8NEB7 543 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 MYRIPQ8NFW9 859 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 ATRIPQ8WXE1 791 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 BSNDQ8WZ55 320 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 ASB16Q96NS5 453 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 HOMER2Q9NSB8 354 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 CLIC5Q9NZA1 410 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 PARP2Q9UGN5 583 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 HDAC9Q9UKV0 1011 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 TMCC3Q9ULS5 477 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 LEMD3Q9Y2U8 911 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 A0A1W2PRQ8 180 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 CTSBP07858 339 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 ZNF131P52739 623 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 DNM1Q05193 864 aaKnown RBP7.79□□□□□ -1.16
COPS3-216ENST00000579716 SEPT2Q15019 361 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 FAM133BQ5BKY9 247 aaKnown RBP7.79□□□□□ -1.16
COPS3-216ENST00000579716 C10orf62Q5T681 223 aaPredicted RBP7.79□□□□□ -1.16
COPS3-216ENST00000579716 LDLRAD1Q5T700 205 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 WFDC3Q8IUB2 231 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 IFNL3Q8IZI9 196 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 EZH1Q92800 747 aaPredicted RBP7.79□□□□□ -1.16
COPS3-216ENST00000579716 IWS1Q96ST2 819 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 INTUQ9ULD6 942 aa7.79□□□□□ -1.16
COPS3-216ENST00000579716 FAM95CA0A1B0GW59 222 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 TRIM64CA6NLI5 447 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 FAM170BA6NMN3 283 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 SLC26A4O43511 780 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 KIF5CO60282 957 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 NBPF7P0C2Y1 421 aaPredicted RBP7.78□□□□□ -1.16
COPS3-216ENST00000579716 ESRRAP11474 423 aaPredicted RBP7.78□□□□□ -1.16
COPS3-216ENST00000579716 MAPK1P28482 360 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 IFT88Q13099 833 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 IKBKEQ14164 716 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 ZC3H12AQ5D1E8 599 aaKnown RBP7.78□□□□□ -1.16
COPS3-216ENST00000579716 PDXDC1Q6P996 788 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 VPS37DQ86XT2 251 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 SUGP1Q8IWZ8 645 aaKnown RBP7.78□□□□□ -1.16
COPS3-216ENST00000579716 SMAP1Q8IYB5 467 aaPredicted RBP7.78□□□□□ -1.16
COPS3-216ENST00000579716 CCDC34Q96HJ3 373 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 C22orf23Q9BZE7 217 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 TSPY26PQ9H489 355 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 PPCSQ9HAB8 311 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 LATS2Q9NRM7 1088 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 ATG3Q9NT62 314 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 EVLQ9UI08 416 aaPredicted RBP7.78□□□□□ -1.16
COPS3-216ENST00000579716 SLC45A1Q9Y2W3 748 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 PPP2R3BQ9Y5P8 575 aa7.78□□□□□ -1.16
COPS3-216ENST00000579716 RAD54L2Q9Y4B4 1467 aa7.77□□□□□ -1.17
COPS3-216ENST00000579716 GAS2O43903 313 aaKnown RBP7.77□□□□□ -1.17
COPS3-216ENST00000579716 NAT1P18440 290 aa7.77□□□□□ -1.17
COPS3-216ENST00000579716 ATP2B4P23634 1241 aa7.77□□□□□ -1.17
COPS3-216ENST00000579716 TNNI2P48788 182 aa7.77□□□□□ -1.17
COPS3-216ENST00000579716 NFKBIBQ15653 356 aa7.77□□□□□ -1.17
COPS3-216ENST00000579716 GRAMD1BQ3KR37 738 aa7.77□□□□□ -1.17
COPS3-216ENST00000579716 ALFQ53S48 1182 aa7.77□□□□□ -1.17
COPS3-216ENST00000579716 EXOSC6Q5RKV6 272 aaKnown RBP7.77□□□□□ -1.17
COPS3-216ENST00000579716 ZAR1Q86SH2 424 aa7.77□□□□□ -1.17
COPS3-216ENST00000579716 SMARCC1Q92922 1105 aaPredicted RBP7.77□□□□□ -1.17
COPS3-216ENST00000579716 OSBPL1AQ9BXW6 950 aa7.77□□□□□ -1.17
COPS3-216ENST00000579716 BHLHE41Q9C0J9 482 aaPredicted RBP7.77□□□□□ -1.17
COPS3-216ENST00000579716 SOX17Q9H6I2 414 aaPredicted RBP7.77□□□□□ -1.17
COPS3-216ENST00000579716 PAK6Q9NQU5 681 aaPredicted RBP7.77□□□□□ -1.17
COPS3-216ENST00000579716 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.77□□□□□ -1.17
COPS3-216ENST00000579716 MRPS23Q9Y3D9 190 aaKnown RBP7.77□□□□□ -1.17
COPS3-216ENST00000579716 ZCCHC6Q5VYS8 1495 aaKnown RBP7.76□□□□□ -1.17
COPS3-216ENST00000579716 METTL12A8MUP2 240 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 ORC4O43929 436 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 COQ9O75208 318 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 C8AP07357 584 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 RXRBP28702 533 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 PIK3CAP42336 1068 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 EIF1AXP47813 144 aaKnown RBP7.76□□□□□ -1.17
COPS3-216ENST00000579716 EXOSC10Q01780 885 aaKnown RBP7.76□□□□□ -1.17
COPS3-216ENST00000579716 SOX4Q06945 474 aaPredicted RBP7.76□□□□□ -1.17
COPS3-216ENST00000579716 POU5F2Q8N7G0 328 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 HELQQ8TDG4 1101 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 USP26Q9BXU7 913 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 CHST12Q9NRB3 414 aa7.76□□□□□ -1.17
COPS3-216ENST00000579716 DDX41Q9UJV9 622 aaKnown RBP7.76□□□□□ -1.17
COPS3-216ENST00000579716 FIBPO43427 364 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 TNFRSF21O75509 655 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 TCEA3O75764 348 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 CCDC159P0C7I6 412 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 RPL17P18621 184 aaKnown RBP7.75□□□□□ -1.17
COPS3-216ENST00000579716 MZF1P28698 734 aaPredicted RBP7.75□□□□□ -1.17
COPS3-216ENST00000579716 FANCCQ00597 558 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 C8orf34Q49A92 452 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 ACBD5Q5T8D3 534 aaPredicted RBP7.75□□□□□ -1.17
COPS3-216ENST00000579716 OTUD6AQ7L8S5 288 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 SKAP1Q86WV1 359 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 RPGRQ92834 1020 aaKnown RBP7.75□□□□□ -1.17
COPS3-216ENST00000579716 PAWRQ96IZ0 340 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms