RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 PUS3Q9BZE2 481 aaKnown RBP11.42□□□□□ -0.58
MSI2-209ENST00000579483 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
MSI2-209ENST00000579483 CD2APQ9Y5K6 639 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 STAT2P52630 851 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 PRPF4BQ13523 1007 aaKnown RBP11.42□□□□□ -0.58
MSI2-209ENST00000579483 TBC1D9BQ66K14 1250 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 PCDHB13Q9Y5F0 798 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 SNX14Q9Y5W7 946 aa11.42□□□□□ -0.58
MSI2-209ENST00000579483 TRIM28Q13263 835 aaKnown RBP11.41□□□□□ -0.58
MSI2-209ENST00000579483 SLC15A2Q16348 729 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 FASTKD5Q7L8L6 764 aaKnown RBP11.41□□□□□ -0.58
MSI2-209ENST00000579483 BLIDQ8IZY5 108 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 UBXN4Q92575 508 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 GDPD2Q9HCC8 539 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 HACL1Q9UJ83 578 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 HSPD1P10809 573 aaKnown RBP11.41□□□□□ -0.58
MSI2-209ENST00000579483 TNNT1P13805 278 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 CRKP46108 304 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 KRT83P78385 493 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
MSI2-209ENST00000579483 PLA2G4DQ86XP0 818 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 MYCT1Q8N699 235 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 TRPM1Q7Z4N2 1603 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 KLHL40Q2TBA0 621 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 CEP135Q66GS9 1140 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 FNBP4Q8N3X1 1017 aaPredicted RBP11.41□□□□□ -0.58
MSI2-209ENST00000579483 KIF18AQ8NI77 898 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 HERC4Q5GLZ8 1057 aaPredicted RBP11.41□□□□□ -0.58
MSI2-209ENST00000579483 PLCD3Q8N3E9 789 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 SREK1Q8WXA9 508 aaKnown RBP11.41□□□□□ -0.58
MSI2-209ENST00000579483 LRFN2Q9ULH4 789 aa11.41□□□□□ -0.58
MSI2-209ENST00000579483 RIMS1Q86UR5 1692 aaKnown RBP11.41□□□□□ -0.58
MSI2-209ENST00000579483 KCNQ2O43526 872 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 SCG2P13521 617 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 TBC1D10BQ4KMP7 808 aaPredicted RBP11.4□□□□□ -0.58
MSI2-209ENST00000579483 KRT40Q6A162 431 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.4□□□□□ -0.58
MSI2-209ENST00000579483 SETBP1Q9Y6X0 1596 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 PRPF6O94906 941 aaKnown RBP11.4□□□□□ -0.58
MSI2-209ENST00000579483 CCND2P30279 289 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 STYK1Q6J9G0 422 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 CD209Q9NNX6 404 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 GOLGA6L7A0A1B0GV03 622 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 USP17L5A8MUK1 530 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 ZMYM1Q5SVZ6 1142 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 GIMAP6Q6P9H5 292 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 NEK8Q86SG6 692 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 CRACR2AQ9BSW2 395 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 CENPHQ9H3R5 247 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 DACT1Q9NYF0 836 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 LARSQ9P2J5 1176 aaKnown RBP11.4□□□□□ -0.58
MSI2-209ENST00000579483 IKBKGQ9Y6K9 419 aa11.4□□□□□ -0.58
MSI2-209ENST00000579483 ATP2A1O14983 1001 aa11.4□□□□□ -0.59
MSI2-209ENST00000579483 GAS8O95995 478 aa11.4□□□□□ -0.59
MSI2-209ENST00000579483 GCFC2P16383 781 aaKnown RBP11.4□□□□□ -0.59
MSI2-209ENST00000579483 ADD2P35612 726 aa11.4□□□□□ -0.59
MSI2-209ENST00000579483 MMP14P50281 582 aa11.4□□□□□ -0.59
MSI2-209ENST00000579483 DNM1Q05193 864 aaKnown RBP11.4□□□□□ -0.59
MSI2-209ENST00000579483 DCAF17Q5H9S7 520 aaPredicted RBP11.4□□□□□ -0.59
MSI2-209ENST00000579483 ISM2Q6H9L7 571 aa11.4□□□□□ -0.59
MSI2-209ENST00000579483 TPH2Q8IWU9 490 aa11.4□□□□□ -0.59
MSI2-209ENST00000579483 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.59
MSI2-209ENST00000579483 RNF34Q969K3 372 aa11.4□□□□□ -0.59
MSI2-209ENST00000579483 WDR11Q9BZH6 1224 aa11.4□□□□□ -0.59
MSI2-209ENST00000579483 CPS1P31327 1500 aa11.4□□□□□ -0.59
MSI2-209ENST00000579483 FSD2A1L4K1 749 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 EEF2P13639 858 aaKnown RBP11.39□□□□□ -0.59
MSI2-209ENST00000579483 LIN9Q5TKA1 542 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 CABP7Q86V35 215 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 KIAA1524Q8TCG1 905 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 ZHX1Q9UKY1 873 aaPredicted RBP11.39□□□□□ -0.59
MSI2-209ENST00000579483 SETD1BQ9UPS6 1966 aaKnown RBP11.39□□□□□ -0.59
MSI2-209ENST00000579483 CNTNAP4Q9C0A0 1308 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 PTPRUQ92729 1446 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 FGAP02671 866 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 TTC14Q96N46 770 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 MTFR1LQ9H019 292 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 PCDHA12Q9UN75 941 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 MINPP1Q9UNW1 487 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 FRMPD2Q68DX3 1309 aaPredicted RBP11.39□□□□□ -0.59
MSI2-209ENST00000579483 ADORA1P30542 326 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 HSPA4P34932 840 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 AOC3Q16853 763 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 KMT5BQ4FZB7 885 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 XKR9Q5GH70 373 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 MIS18BP1Q6P0N0 1132 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 RPS6KC1Q96S38 1066 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 ZNF277Q9NRM2 450 aaPredicted RBP11.39□□□□□ -0.59
MSI2-209ENST00000579483 RASAL2Q9UJF2 1139 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 CD163L1Q9NR16 1453 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 MED14O60244 1454 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 EXOC3O60645 756 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 GNAT1P11488 350 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 RPS12P25398 132 aaKnown RBP11.39□□□□□ -0.59
MSI2-209ENST00000579483 MRPS9P82933 396 aaKnown RBP11.39□□□□□ -0.59
MSI2-209ENST00000579483 HLFQ16534 295 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 CCDC14Q49A88 953 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 FAM200AQ8TCP9 573 aa11.39□□□□□ -0.59
MSI2-209ENST00000579483 DBNLQ9UJU6 430 aaKnown RBP11.39□□□□□ -0.59
MSI2-209ENST00000579483 TACC1O75410 805 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms