RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ZCCHC17Q9NP64 241 aaKnown RBP25.69■■□□□ 1.7
CDC42EP4-203ENST00000578516 COL13A1Q5TAT6 717 aaPredicted RBP25.68■■□□□ 1.7
CDC42EP4-203ENST00000578516 KIAA1211Q6ZU35 1233 aa25.68■■□□□ 1.7
CDC42EP4-203ENST00000578516 RPAP3Q9H6T3 665 aaPredicted RBP25.68■■□□□ 1.7
CDC42EP4-203ENST00000578516 VCPKMTQ9H867 229 aa25.68■■□□□ 1.7
CDC42EP4-203ENST00000578516 TLR2O60603 784 aa25.67■■□□□ 1.7
CDC42EP4-203ENST00000578516 KDM4AO75164 1064 aa25.67■■□□□ 1.7
CDC42EP4-203ENST00000578516 USP14P54578 494 aa25.67■■□□□ 1.7
CDC42EP4-203ENST00000578516 POTEEQ6S8J3 1075 aa25.67■■□□□ 1.7
CDC42EP4-203ENST00000578516 NYAP2Q9P242 653 aa25.67■■□□□ 1.7
CDC42EP4-203ENST00000578516 CASC1Q6TDU7 716 aa25.66■■□□□ 1.7
CDC42EP4-203ENST00000578516 CD99L2Q8TCZ2 262 aa25.66■■□□□ 1.7
CDC42EP4-203ENST00000578516 P2RX7Q99572 595 aaKnown RBP25.66■■□□□ 1.7
CDC42EP4-203ENST00000578516 ARHGAP39Q9C0H5 1083 aa25.66■■□□□ 1.7
CDC42EP4-203ENST00000578516 RNF41Q9H4P4 317 aaPredicted RBP25.66■■□□□ 1.7
CDC42EP4-203ENST00000578516 PRDM10Q9NQV6 1147 aa25.66■■□□□ 1.7
CDC42EP4-203ENST00000578516 MTMR7Q9Y216 660 aa25.66■■□□□ 1.7
CDC42EP4-203ENST00000578516 SLC45A1Q9Y2W3 748 aa25.66■■□□□ 1.7
CDC42EP4-203ENST00000578516 DOCK3Q8IZD9 2030 aa25.66■■□□□ 1.7
CDC42EP4-203ENST00000578516 SLC27A2O14975 620 aa25.65■■□□□ 1.7
CDC42EP4-203ENST00000578516 NDUFB10O96000 172 aa25.65■■□□□ 1.7
CDC42EP4-203ENST00000578516 IRX3P78415 501 aaPredicted RBP25.65■■□□□ 1.7
CDC42EP4-203ENST00000578516 SAMD1Q6SPF0 538 aaPredicted RBP25.65■■□□□ 1.7
CDC42EP4-203ENST00000578516 C17orf99Q6UX52 265 aa25.65■■□□□ 1.7
CDC42EP4-203ENST00000578516 CYB5R4Q7L1T6 521 aa25.65■■□□□ 1.7
CDC42EP4-203ENST00000578516 SMCR8Q8TEV9 937 aaPredicted RBP25.65■■□□□ 1.7
CDC42EP4-203ENST00000578516 STX8Q9UNK0 236 aa25.65■■□□□ 1.7
CDC42EP4-203ENST00000578516 GTF3C3Q9Y5Q9 886 aa25.65■■□□□ 1.7
CDC42EP4-203ENST00000578516 FKTNO75072 461 aa25.64■■□□□ 1.7
CDC42EP4-203ENST00000578516 TTLL1O95922 423 aa25.64■■□□□ 1.7
CDC42EP4-203ENST00000578516 CTGFP29279 349 aa25.64■■□□□ 1.7
CDC42EP4-203ENST00000578516 FAM83BQ5T0W9 1011 aa25.64■■□□□ 1.7
CDC42EP4-203ENST00000578516 TANGO6Q9C0B7 1094 aa25.64■■□□□ 1.7
CDC42EP4-203ENST00000578516 FBXO28Q9NVF7 368 aa25.64■■□□□ 1.7
CDC42EP4-203ENST00000578516 E7EWF7 191 aa25.63■■□□□ 1.69
CDC42EP4-203ENST00000578516 BCRP11274 1271 aa25.63■■□□□ 1.69
CDC42EP4-203ENST00000578516 OSBPP22059 807 aa25.63■■□□□ 1.69
CDC42EP4-203ENST00000578516 HOXA7P31268 230 aaPredicted RBP25.63■■□□□ 1.69
CDC42EP4-203ENST00000578516 CREB3L3Q68CJ9 461 aa25.63■■□□□ 1.69
CDC42EP4-203ENST00000578516 ANKRD13CQ8N6S4 541 aa25.63■■□□□ 1.69
CDC42EP4-203ENST00000578516 SH2D4AQ9H788 454 aa25.63■■□□□ 1.69
CDC42EP4-203ENST00000578516 TXNRD2Q9NNW7 524 aa25.63■■□□□ 1.69
CDC42EP4-203ENST00000578516 PNMA3Q9UL41 463 aa25.63■■□□□ 1.69
CDC42EP4-203ENST00000578516 USP17L15C9J2P7 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 USP17L13C9JLJ4 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 USP17L11C9JVI0 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 USP17L18D6R9N7 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 USP17L22D6RA61 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 USP17L17D6RBQ6 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 USP17L19D6RCP7 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 USP17L20D6RJB6 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 HERVK_113P62684 666 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 USP17L24Q0WX57 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 NECTIN1Q15223 517 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 RCSD1Q6JBY9 416 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 CATSPERGQ6ZRH7 1159 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 ESR2Q92731 530 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 ZSWIM5Q9P217 1185 aa25.62■■□□□ 1.69
CDC42EP4-203ENST00000578516 F5H6K3 240 aa25.61■■□□□ 1.69
CDC42EP4-203ENST00000578516 PCP11498 1178 aaKnown RBP25.61■■□□□ 1.69
CDC42EP4-203ENST00000578516 SP3Q02447 781 aa25.61■■□□□ 1.69
CDC42EP4-203ENST00000578516 KLRC3Q07444 240 aa25.61■■□□□ 1.69
CDC42EP4-203ENST00000578516 PABPC4Q13310 644 aaKnown RBP eCLIP25.61■■□□□ 1.69
CDC42EP4-203ENST00000578516 CHST3Q7LGC8 479 aa25.61■■□□□ 1.69
CDC42EP4-203ENST00000578516 PAGR1Q9BTK6 254 aa25.61■■□□□ 1.69
CDC42EP4-203ENST00000578516 GOPCQ9HD26 462 aa25.61■■□□□ 1.69
CDC42EP4-203ENST00000578516 SPDYE16A6NNV3 312 aaPredicted RBP25.6■■□□□ 1.69
CDC42EP4-203ENST00000578516 MKL1Q969V6 931 aa25.6■■□□□ 1.69
CDC42EP4-203ENST00000578516 TMEM47Q9BQJ4 181 aa25.6■■□□□ 1.69
CDC42EP4-203ENST00000578516 PLXNB2O15031 1838 aa25.59■■□□□ 1.69
CDC42EP4-203ENST00000578516 WDR46O15213 610 aaKnown RBP25.59■■□□□ 1.69
CDC42EP4-203ENST00000578516 CNMDO75829 334 aa25.59■■□□□ 1.69
CDC42EP4-203ENST00000578516 NOVP48745 357 aa25.59■■□□□ 1.69
CDC42EP4-203ENST00000578516 NOM1Q5C9Z4 860 aaKnown RBP25.59■■□□□ 1.69
CDC42EP4-203ENST00000578516 SLFN13Q68D06 897 aa25.59■■□□□ 1.69
CDC42EP4-203ENST00000578516 RASEFQ8IZ41 740 aa25.59■■□□□ 1.69
CDC42EP4-203ENST00000578516 LPAR1Q92633 364 aa25.59■■□□□ 1.69
CDC42EP4-203ENST00000578516 ATG4CQ96DT6 458 aa25.59■■□□□ 1.69
CDC42EP4-203ENST00000578516 ANTXR2P58335 489 aa25.58■■□□□ 1.69
CDC42EP4-203ENST00000578516 KRT23Q9C075 422 aa25.58■■□□□ 1.69
CDC42EP4-203ENST00000578516 SENP2Q9HC62 589 aa25.58■■□□□ 1.69
CDC42EP4-203ENST00000578516 TCP11L1Q9NUJ3 509 aa25.58■■□□□ 1.69
CDC42EP4-203ENST00000578516 ISY1Q9ULR0 285 aaKnown RBP25.58■■□□□ 1.69
CDC42EP4-203ENST00000578516 TNKSO95271 1327 aa25.58■■□□□ 1.69
CDC42EP4-203ENST00000578516 FLOT1O75955 427 aa25.57■■□□□ 1.68
CDC42EP4-203ENST00000578516 LACTBP83111 547 aaPredicted RBP25.57■■□□□ 1.68
CDC42EP4-203ENST00000578516 MB21D2Q8IYB1 491 aaPredicted RBP25.57■■□□□ 1.68
CDC42EP4-203ENST00000578516 ENAHQ8N8S7 591 aaPredicted RBP25.57■■□□□ 1.68
CDC42EP4-203ENST00000578516 CNNM2Q9H8M5 875 aa25.57■■□□□ 1.68
CDC42EP4-203ENST00000578516 GPHNQ9NQX3 736 aaPredicted RBP25.57■■□□□ 1.68
CDC42EP4-203ENST00000578516 BTBD7Q9P203 1132 aa25.57■■□□□ 1.68
CDC42EP4-203ENST00000578516 RBPJLQ9UBG7 517 aa25.57■■□□□ 1.68
CDC42EP4-203ENST00000578516 MCCP23508 829 aa25.56■■□□□ 1.68
CDC42EP4-203ENST00000578516 GMCL1P1Q8NEA9 526 aa25.56■■□□□ 1.68
CDC42EP4-203ENST00000578516 ZSCAN10Q96SZ4 725 aaPredicted RBP25.56■■□□□ 1.68
CDC42EP4-203ENST00000578516 TOP1P11387 765 aaKnown RBP25.55■■□□□ 1.68
CDC42EP4-203ENST00000578516 Q3C1V9 767 aa25.55■■□□□ 1.68
CDC42EP4-203ENST00000578516 KCTD1Q719H9 257 aa25.55■■□□□ 1.68
CDC42EP4-203ENST00000578516 RALYLQ86SE5 291 aaKnown RBP25.55■■□□□ 1.68
CDC42EP4-203ENST00000578516 NCOA7Q8NI08 942 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms