RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 TRIM75PA6NK02 468 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 TOP1P11387 765 aaKnown RBP14.93□□□□□ -0.02
MKS1-206ENST00000577824 CETPP11597 493 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 CASTP20810 708 aaKnown RBP14.93□□□□□ -0.02
MKS1-206ENST00000577824 LIFRP42702 1097 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 RUFY3Q7L099 469 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 SGMS1Q86VZ5 419 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 REM2Q8IYK8 340 aaPredicted RBP14.93□□□□□ -0.02
MKS1-206ENST00000577824 IL27Q8NEV9 243 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 LPAR1Q92633 364 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 ZKSCAN3Q9BRR0 538 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 VCPKMTQ9H867 229 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 LY9Q9HBG7 655 aa14.93□□□□□ -0.02
MKS1-206ENST00000577824 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
MKS1-206ENST00000577824 SNHG28P0DPA3 235 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 MAP2K2P36507 400 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 VEGFBP49765 207 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 INHBEP58166 350 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 SREBF2Q12772 1141 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 USP17L2Q6R6M4 530 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 BRI3BPQ8WY22 251 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 GMCL1Q96IK5 515 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 FEZ1Q99689 392 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 TMEM47Q9BQJ4 181 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 ALDH8A1Q9H2A2 487 aaPredicted RBP14.92□□□□□ -0.02
MKS1-206ENST00000577824 ZCCHC17Q9NP64 241 aaKnown RBP14.92□□□□□ -0.02
MKS1-206ENST00000577824 EMILIN3Q9NT22 766 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 CLIP2Q9UDT6 1046 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 SLC45A1Q9Y2W3 748 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 NID2Q14112 1375 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 A0A0G2JMZ2 1700 aa14.92□□□□□ -0.02
MKS1-206ENST00000577824 ERICH2A1L162 156 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 IFIT3O14879 490 aaKnown RBP14.91□□□□□ -0.02
MKS1-206ENST00000577824 VCAM1P19320 739 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 TM4SF4P48230 202 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 HMGCS2P54868 508 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 WTAPQ15007 396 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 TMEM67Q5HYA8 995 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 IFIT1BQ5T764 474 aaKnown RBP14.91□□□□□ -0.02
MKS1-206ENST00000577824 FASTKD5Q7L8L6 764 aaKnown RBP14.91□□□□□ -0.02
MKS1-206ENST00000577824 CHST3Q7LGC8 479 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 LRRC47Q8N1G4 583 aaKnown RBP14.91□□□□□ -0.02
MKS1-206ENST00000577824 TMTC2Q8N394 836 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 GOPCQ9HD26 462 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 AGTPBP1Q9UPW5 1226 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 CYP46A1Q9Y6A2 500 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 PARP14Q460N5 1801 aa14.91□□□□□ -0.02
MKS1-206ENST00000577824 CCL15-CCL14A0A0B4J2E2 113 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 WDR46O15213 610 aaKnown RBP14.9□□□□□ -0.02
MKS1-206ENST00000577824 RCAN1P53805 252 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 EVCP57679 992 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
MKS1-206ENST00000577824 CCL15Q16663 113 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 KIAA1755Q5JYT7 1200 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 GPAT2Q6NUI2 795 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 PAXIP1Q6ZW49 1069 aaPredicted RBP14.9□□□□□ -0.02
MKS1-206ENST00000577824 ANKRD23Q86SG2 305 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 DNAJC5GQ8N7S2 189 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 KAT14Q9H8E8 782 aa14.9□□□□□ -0.02
MKS1-206ENST00000577824 F5H6K3 240 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 AOC2O75106 756 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 NDUFB10O96000 172 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 PDHBP11177 359 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 CPA1P15085 419 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 HOXA7P31268 230 aaPredicted RBP14.89□□□□□ -0.03
MKS1-206ENST00000577824 ATP2B2Q01814 1243 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 KIF23Q02241 960 aaPredicted RBP14.89□□□□□ -0.03
MKS1-206ENST00000577824 KLRC3Q07444 240 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 TROAPQ12815 778 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 MKRN3Q13064 507 aaKnown RBP14.89□□□□□ -0.03
MKS1-206ENST00000577824 DGKZQ13574 1117 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 ZIC5Q96T25 663 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 MAP3K14Q99558 947 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 PTPN18Q99952 460 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 UPF3BQ9BZI7 483 aaKnown RBP14.89□□□□□ -0.03
MKS1-206ENST00000577824 SENP2Q9HC62 589 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 TMOD4Q9NZQ9 345 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 RLFQ13129 1914 aa14.89□□□□□ -0.03
MKS1-206ENST00000577824 BTBD19C9JJ37 291 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 IGF2BP3O00425 579 aaKnown RBP eCLIP14.88□□□□□ -0.03
MKS1-206ENST00000577824 DDAH1O94760 285 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 TOB2Q14106 344 aaPredicted RBP14.88□□□□□ -0.03
MKS1-206ENST00000577824 RABEP1Q15276 862 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 ZYXQ15942 572 aaKnown RBP14.88□□□□□ -0.03
MKS1-206ENST00000577824 TREML2Q5T2D2 321 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 Q6ZUG5 572 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 DCAF4Q8WV16 495 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 TCEANC2Q96MN5 208 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 CFHR5Q9BXR6 569 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 LRRC2Q9BYS8 371 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 GPHNQ9NQX3 736 aaPredicted RBP14.88□□□□□ -0.03
MKS1-206ENST00000577824 MYPNQ86TC9 1320 aa14.88□□□□□ -0.03
MKS1-206ENST00000577824 PLA2G6O60733 806 aa14.87□□□□□ -0.03
MKS1-206ENST00000577824 SLFN13Q68D06 897 aa14.87□□□□□ -0.03
MKS1-206ENST00000577824 APOA5Q6Q788 366 aa14.87□□□□□ -0.03
MKS1-206ENST00000577824 GADL1Q6ZQY3 521 aa14.87□□□□□ -0.03
MKS1-206ENST00000577824 IFNL1Q8IU54 200 aa14.87□□□□□ -0.03
MKS1-206ENST00000577824 ZNF654Q8IZM8 581 aa14.87□□□□□ -0.03
MKS1-206ENST00000577824 FAM43AQ8N2R8 423 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms