RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-211ENST00000575397 PROCA1Q8NCQ7 364 aaPredicted RBP11.21□□□□□ -0.61
RFWD3-211ENST00000575397 GPT2Q8TD30 523 aa11.21□□□□□ -0.61
RFWD3-211ENST00000575397 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.61
RFWD3-211ENST00000575397 EAF2Q96CJ1 260 aaPredicted RBP11.21□□□□□ -0.61
RFWD3-211ENST00000575397 ASCC2Q9H1I8 757 aaPredicted RBP11.21□□□□□ -0.61
RFWD3-211ENST00000575397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.21□□□□□ -0.61
RFWD3-211ENST00000575397 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
RFWD3-211ENST00000575397 PDRG1Q9NUG6 133 aa11.21□□□□□ -0.61
RFWD3-211ENST00000575397 GNL3LQ9NVN8 582 aaKnown RBP11.21□□□□□ -0.61
RFWD3-211ENST00000575397 ABCF2Q9UG63 623 aa11.21□□□□□ -0.61
RFWD3-211ENST00000575397 FBXO3Q9UK99 471 aa11.21□□□□□ -0.61
RFWD3-211ENST00000575397 DENND2AQ9ULE3 1009 aa11.21□□□□□ -0.61
RFWD3-211ENST00000575397 SMC3Q9UQE7 1217 aa11.21□□□□□ -0.61
RFWD3-211ENST00000575397 STX6O43752 255 aa11.2□□□□□ -0.62
RFWD3-211ENST00000575397 CASTP20810 708 aaKnown RBP11.2□□□□□ -0.62
RFWD3-211ENST00000575397 GCLCP48506 637 aaPredicted RBP11.2□□□□□ -0.62
RFWD3-211ENST00000575397 ZNF280CQ8ND82 737 aa11.2□□□□□ -0.62
RFWD3-211ENST00000575397 FSD1Q9BTV5 496 aa11.2□□□□□ -0.62
RFWD3-211ENST00000575397 IL25Q9H293 177 aa11.2□□□□□ -0.62
RFWD3-211ENST00000575397 PA2G4Q9UQ80 394 aaKnown RBP11.2□□□□□ -0.62
RFWD3-211ENST00000575397 CUL9Q8IWT3 2517 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 SPTBN5Q9NRC6 3674 aaKnown RBP11.19□□□□□ -0.62
RFWD3-211ENST00000575397 ATAD5Q96QE3 1844 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 LAMA2P24043 3122 aaKnown RBP11.19□□□□□ -0.62
RFWD3-211ENST00000575397 MROH7-TTC4A0A0A0MT08 1334 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 POTEB2H3BUK9 544 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 MAP4K4O95819 1239 aaPredicted RBP11.19□□□□□ -0.62
RFWD3-211ENST00000575397 COL6A1P12109 1028 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 CCND3P30281 292 aaPredicted RBP11.19□□□□□ -0.62
RFWD3-211ENST00000575397 MCM5P33992 734 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 RHBDL3P58872 404 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 CACNB2Q08289 660 aaPredicted RBP11.19□□□□□ -0.62
RFWD3-211ENST00000575397 RASGRF1Q13972 1273 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 LRRFIP1Q32MZ4 808 aaKnown RBP11.19□□□□□ -0.62
RFWD3-211ENST00000575397 MAP3K21Q5TCX8 1036 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 CCDC102BQ68D86 513 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 PDLIM2Q96JY6 352 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 JAKMIP1Q96N16 626 aaKnown RBP11.19□□□□□ -0.62
RFWD3-211ENST00000575397 TXNRD2Q9NNW7 524 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 CEP126Q9P2H0 1117 aa11.19□□□□□ -0.62
RFWD3-211ENST00000575397 RBM8AQ9Y5S9 174 aaKnown RBP11.19□□□□□ -0.62
RFWD3-211ENST00000575397 SEMA3EO15041 775 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 TBC1D12O60347 775 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 CAP2P40123 477 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 UBE2HP62256 183 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 NMIQ13287 307 aaPredicted RBP11.18□□□□□ -0.62
RFWD3-211ENST00000575397 PABPC4Q13310 644 aaKnown RBP eCLIP11.18□□□□□ -0.62
RFWD3-211ENST00000575397 CCL14Q16627 93 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 UVSSAQ2YD98 709 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 TNNI3KQ59H18 835 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 ZNF384Q8TF68 577 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.18□□□□□ -0.62
RFWD3-211ENST00000575397 P2RX7Q99572 595 aaKnown RBP11.18□□□□□ -0.62
RFWD3-211ENST00000575397 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 OSBPL5Q9H0X9 879 aaPredicted RBP11.18□□□□□ -0.62
RFWD3-211ENST00000575397 RRAGDQ9NQL2 400 aaPredicted RBP11.18□□□□□ -0.62
RFWD3-211ENST00000575397 MORF4L1Q9UBU8 362 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 FPGT-TNNI3KV9GXZ4 949 aa11.18□□□□□ -0.62
RFWD3-211ENST00000575397 USP17L5A8MUK1 530 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 SLC27A2O14975 620 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 CIAO1O76071 339 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 F13A1P00488 732 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
RFWD3-211ENST00000575397 IL15P40933 162 aaPredicted RBP11.17□□□□□ -0.62
RFWD3-211ENST00000575397 TIMM10P62072 90 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 IRX3P78415 501 aaPredicted RBP11.17□□□□□ -0.62
RFWD3-211ENST00000575397 MECOMQ03112 1051 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 MTMR2Q13614 643 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 Q3C1V9 767 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 SH3D19Q5HYK7 790 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 CCDC183Q5T5S1 534 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 LHX8Q68G74 356 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 BLOC1S2Q6QNY1 142 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 ZSCAN30Q86W11 494 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
RFWD3-211ENST00000575397 HAUS7Q99871 368 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 TMEM63CQ9P1W3 806 aa11.17□□□□□ -0.62
RFWD3-211ENST00000575397 COL2A1P02458 1487 aaPredicted RBP11.17□□□□□ -0.62
RFWD3-211ENST00000575397 GPR75-ASB3A0A0A6YYF3 556 aa11.16□□□□□ -0.62
RFWD3-211ENST00000575397 SYT1P21579 422 aa11.16□□□□□ -0.62
RFWD3-211ENST00000575397 RPS6KB1P23443 525 aa11.16□□□□□ -0.62
RFWD3-211ENST00000575397 JAG1P78504 1218 aa11.16□□□□□ -0.62
RFWD3-211ENST00000575397 PTH1RQ03431 593 aa11.16□□□□□ -0.62
RFWD3-211ENST00000575397 SHROOM1Q2M3G4 852 aaPredicted RBP11.16□□□□□ -0.62
RFWD3-211ENST00000575397 SLF2Q8IX21 1173 aa11.16□□□□□ -0.62
RFWD3-211ENST00000575397 SENP6Q9GZR1 1112 aaPredicted RBP11.16□□□□□ -0.62
RFWD3-211ENST00000575397 CCDC8Q9H0W5 538 aaPredicted RBP11.16□□□□□ -0.62
RFWD3-211ENST00000575397 PORCNQ9H237 461 aa11.16□□□□□ -0.62
RFWD3-211ENST00000575397 TSPY26PQ9H489 355 aa11.16□□□□□ -0.62
RFWD3-211ENST00000575397 DNAH12Q6ZR08 3092 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 ELP1O95163 1332 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
RFWD3-211ENST00000575397 HERVK_113P62684 666 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 ZNF697Q5TEC3 545 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 FAM109BQ6ICB4 259 aaPredicted RBP11.15□□□□□ -0.62
RFWD3-211ENST00000575397 PI16Q6UXB8 463 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 GPR142Q7Z601 462 aa11.15□□□□□ -0.62
RFWD3-211ENST00000575397 GPRC5AQ8NFJ5 357 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms