RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 PABPC4Q13310 644 aaKnown RBP eCLIP39.04■■■■□ 3.846e-11■□□□□ 10.8
CTDNEP1-209ENST00000574205 TAF1CQ15572 869 aaPredicted RBP39.04■■■■□ 3.84
CTDNEP1-209ENST00000574205 GOPCQ9HD26 462 aa39.04■■■■□ 3.84
CTDNEP1-209ENST00000574205 VCAM1P19320 739 aa39.03■■■■□ 3.84
CTDNEP1-209ENST00000574205 ZKSCAN1P17029 563 aaPredicted RBP39.02■■■■□ 3.84
CTDNEP1-209ENST00000574205 HSPA4P34932 840 aa39.02■■■■□ 3.84
CTDNEP1-209ENST00000574205 PNMA3Q9UL41 463 aa39.02■■■■□ 3.84
CTDNEP1-209ENST00000574205 HOXA7P31268 230 aaPredicted RBP39.01■■■■□ 3.84
CTDNEP1-209ENST00000574205 CRHR2Q13324 411 aa39.01■■■■□ 3.84
CTDNEP1-209ENST00000574205 TSGA10IPQ3SY00 556 aa39.01■■■■□ 3.84
CTDNEP1-209ENST00000574205 CCDC178Q5BJE1 867 aa39.01■■■■□ 3.84
CTDNEP1-209ENST00000574205 TTC14Q96N46 770 aa39.01■■■■□ 3.84
CTDNEP1-209ENST00000574205 PARK7Q99497 189 aaKnown RBP39.01■■■■□ 3.84
CTDNEP1-209ENST00000574205 ZFYVE28Q9HCC9 887 aa39.01■■■■□ 3.84
CTDNEP1-209ENST00000574205 TBC1D8O95759 1140 aa39■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP26Q9BXU7 913 aa39■■■■□ 3.83
CTDNEP1-209ENST00000574205 FOXN1O15353 648 aa38.99■■■■□ 3.83
CTDNEP1-209ENST00000574205 KIAA1755Q5JYT7 1200 aa38.99■■■■□ 3.83
CTDNEP1-209ENST00000574205 ZKSCAN3Q9BRR0 538 aa38.99■■■■□ 3.83
CTDNEP1-209ENST00000574205 SPICE1Q8N0Z3 855 aa38.99■■■■□ 3.83
CTDNEP1-209ENST00000574205 LRRC47Q8N1G4 583 aaKnown RBP38.99■■■■□ 3.83
CTDNEP1-209ENST00000574205 ZSCAN10Q96SZ4 725 aaPredicted RBP38.99■■■■□ 3.83
CTDNEP1-209ENST00000574205 UBAC1Q9BSL1 405 aa38.99■■■■□ 3.83
CTDNEP1-209ENST00000574205 F5H6K3 240 aa38.98■■■■□ 3.83
CTDNEP1-209ENST00000574205 KLRC3Q07444 240 aa38.98■■■■□ 3.83
CTDNEP1-209ENST00000574205 CYB5R4Q7L1T6 521 aa38.98■■■■□ 3.83
CTDNEP1-209ENST00000574205 DGKHQ86XP1 1220 aa38.98■■■■□ 3.83
CTDNEP1-209ENST00000574205 RASEFQ8IZ41 740 aa38.98■■■■□ 3.83
CTDNEP1-209ENST00000574205 GMCL1P1Q8NEA9 526 aa38.98■■■■□ 3.83
CTDNEP1-209ENST00000574205 KCNB2Q92953 911 aa38.98■■■■□ 3.83
CTDNEP1-209ENST00000574205 TSKSQ9UJT2 592 aa38.98■■■■□ 3.83
CTDNEP1-209ENST00000574205 OSBPP22059 807 aa38.97■■■■□ 3.83
CTDNEP1-209ENST00000574205 C8orf34Q49A92 452 aa38.97■■■■□ 3.83
CTDNEP1-209ENST00000574205 RCSD1Q6JBY9 416 aa38.97■■■■□ 3.83
CTDNEP1-209ENST00000574205 ASCC2Q9H1I8 757 aaPredicted RBP38.97■■■■□ 3.83
CTDNEP1-209ENST00000574205 RPAP3Q9H6T3 665 aaPredicted RBP38.97■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP17L15C9J2P7 530 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP17L13C9JLJ4 530 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP17L11C9JVI0 530 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP17L18D6R9N7 530 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP17L22D6RA61 530 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP17L17D6RBQ6 530 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP17L19D6RCP7 530 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP17L20D6RJB6 530 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 WDR46O15213 610 aaKnown RBP38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 RAD21O60216 631 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 CYP2C8P10632 490 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 IRX3P78415 501 aaPredicted RBP38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 USP17L24Q0WX57 530 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 KRT32Q14532 448 aa38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 MB21D2Q8IYB1 491 aaPredicted RBP38.96■■■■□ 3.83
CTDNEP1-209ENST00000574205 TNKSO95271 1327 aa38.95■■■■□ 3.83
CTDNEP1-209ENST00000574205 TLR2O60603 784 aa38.95■■■■□ 3.83
CTDNEP1-209ENST00000574205 TOP1P11387 765 aaKnown RBP38.95■■■■□ 3.83
CTDNEP1-209ENST00000574205 R3HDMLQ9H3Y0 253 aa38.95■■■■□ 3.83
CTDNEP1-209ENST00000574205 NDUFB10O96000 172 aa38.94■■■■□ 3.82
CTDNEP1-209ENST00000574205 CTCFP49711 727 aaPredicted RBP38.94■■■■□ 3.82
CTDNEP1-209ENST00000574205 CATSPERGQ6ZRH7 1159 aa38.94■■■■□ 3.82
CTDNEP1-209ENST00000574205 TMEM47Q9BQJ4 181 aa38.94■■■■□ 3.82
CTDNEP1-209ENST00000574205 ENAHQ8N8S7 591 aaPredicted RBP38.94■■■■□ 3.82
CTDNEP1-209ENST00000574205 SMCR8Q8TEV9 937 aaPredicted RBP38.94■■■■□ 3.82
CTDNEP1-209ENST00000574205 MCCP23508 829 aa38.93■■■■□ 3.82
CTDNEP1-209ENST00000574205 NOM1Q5C9Z4 860 aaKnown RBP38.93■■■■□ 3.82
CTDNEP1-209ENST00000574205 ANKS1AQ92625 1134 aa38.93■■■■□ 3.82
CTDNEP1-209ENST00000574205 HSPA8P11142 646 aaKnown RBP38.92■■■■□ 3.82
CTDNEP1-209ENST00000574205 SART3Q15020 963 aaKnown RBP38.92■■■■□ 3.82
CTDNEP1-209ENST00000574205 TANGO6Q9C0B7 1094 aa38.92■■■■□ 3.82
CTDNEP1-209ENST00000574205 ADGRA2Q96PE1 1338 aa38.91■■■■□ 3.82
CTDNEP1-209ENST00000574205 MCM5P33992 734 aa38.91■■■■□ 3.82
CTDNEP1-209ENST00000574205 NEK1Q96PY6 1258 aa38.91■■■■□ 3.82
CTDNEP1-209ENST00000574205 SNX14Q9Y5W7 946 aa38.91■■■■□ 3.82
CTDNEP1-209ENST00000574205 ADCK5Q3MIX3 580 aa38.9■■■■□ 3.82
CTDNEP1-209ENST00000574205 SLFN13Q68D06 897 aa38.9■■■■□ 3.82
CTDNEP1-209ENST00000574205 MTA3Q9BTC8 594 aa38.9■■■■□ 3.82
CTDNEP1-209ENST00000574205 ERICH2A1L162 156 aa38.89■■■■□ 3.82
CTDNEP1-209ENST00000574205 ANTXR2P58335 489 aa38.89■■■■□ 3.82
CTDNEP1-209ENST00000574205 SEC23AQ15436 765 aa38.89■■■■□ 3.82
CTDNEP1-209ENST00000574205 CHST3Q7LGC8 479 aa38.89■■■■□ 3.82
CTDNEP1-209ENST00000574205 GPR25O00155 361 aa38.89■■■■□ 3.82
CTDNEP1-209ENST00000574205 FAM83BQ5T0W9 1011 aa38.89■■■■□ 3.82
CTDNEP1-209ENST00000574205 GMCL1Q96IK5 515 aa38.89■■■■□ 3.82
CTDNEP1-209ENST00000574205 P2RX7Q99572 595 aaKnown RBP38.89■■■■□ 3.82
CTDNEP1-209ENST00000574205 IFIT3O14879 490 aaKnown RBP38.88■■■■□ 3.81
CTDNEP1-209ENST00000574205 SEC24BO95487 1268 aa38.88■■■■□ 3.81
CTDNEP1-209ENST00000574205 IFIT1BQ5T764 474 aaKnown RBP38.88■■■■□ 3.81
CTDNEP1-209ENST00000574205 GCLCP48506 637 aaPredicted RBP38.87■■■■□ 3.81
CTDNEP1-209ENST00000574205 HERVK_113P62684 666 aa38.87■■■■□ 3.81
CTDNEP1-209ENST00000574205 C17orf99Q6UX52 265 aa38.87■■■■□ 3.81
CTDNEP1-209ENST00000574205 NUP88Q99567 741 aaPredicted RBP38.87■■■■□ 3.81
CTDNEP1-209ENST00000574205 KAT14Q9H8E8 782 aa38.87■■■■□ 3.81
CTDNEP1-209ENST00000574205 PRC1O43663 620 aa38.86■■■■□ 3.81
CTDNEP1-209ENST00000574205 HMGB1P09429 215 aaKnown RBP38.86■■■■□ 3.81
CTDNEP1-209ENST00000574205 SLC1A4P43007 532 aa38.86■■■■□ 3.81
CTDNEP1-209ENST00000574205 LBX1P52954 281 aa38.86■■■■□ 3.81
CTDNEP1-209ENST00000574205 COG2Q14746 738 aa38.86■■■■□ 3.81
CTDNEP1-209ENST00000574205 PARP14Q460N5 1801 aa38.86■■■■□ 3.81
CTDNEP1-209ENST00000574205 RLFQ13129 1914 aa38.86■■■■□ 3.81
CTDNEP1-209ENST00000574205 COL9A3Q14050 684 aaPredicted RBP38.85■■■■□ 3.81
CTDNEP1-209ENST00000574205 PNMA1Q8ND90 353 aa38.85■■■■□ 3.81
CTDNEP1-209ENST00000574205 GTF3C2Q8WUA4 911 aaPredicted RBP38.85■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms