RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 IQUBQ8NA54 791 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 ANKZF1Q9H8Y5 726 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 RBM28Q9NW13 759 aaKnown RBP17.71■□□□□ 0.43
NUP88-207ENST00000573584 SLAIN2Q9P270 581 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 TTF2Q9UNY4 1162 aaKnown RBP17.71■□□□□ 0.43
NUP88-207ENST00000573584 ANKRD36CQ5JPF3 1778 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 ITIH6Q6UXX5 1313 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 ARAP2Q8WZ64 1704 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 CHRNDQ07001 517 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 TUBB2AQ13885 445 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 KRT31Q15323 416 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 RRAGBQ5VZM2 374 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 IQCA1Q86XH1 822 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 TMTC1Q8IUR5 882 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 TXLNBQ8N3L3 684 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 ACRBPQ8NEB7 543 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 TUBB2BQ9BVA1 445 aa17.71■□□□□ 0.43
NUP88-207ENST00000573584 NUP98P52948 1817 aa17.71■□□□□ 0.42
NUP88-207ENST00000573584 CYP2D7A0A087X1C5 515 aa17.7■□□□□ 0.42
NUP88-207ENST00000573584 TROAPQ12815 778 aa17.7■□□□□ 0.42
NUP88-207ENST00000573584 SLC35F6Q8N357 371 aa17.7■□□□□ 0.42
NUP88-207ENST00000573584 TNFRSF25Q93038 417 aa17.7■□□□□ 0.42
NUP88-207ENST00000573584 ATP2C1P98194 919 aaPredicted RBP17.7■□□□□ 0.42
NUP88-207ENST00000573584 CDC5LQ99459 802 aaKnown RBP17.7■□□□□ 0.42
NUP88-207ENST00000573584 VPS16Q9H269 839 aa17.7■□□□□ 0.42
NUP88-207ENST00000573584 XDHP47989 1333 aa17.7■□□□□ 0.42
NUP88-207ENST00000573584 SLIT2O94813 1529 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 LRRC10BA6NIK2 292 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 MAP2K7O14733 419 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 NPY5RQ15761 445 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 HNRNPLLQ8WVV9 542 aaKnown RBP17.69■□□□□ 0.42
NUP88-207ENST00000573584 LIMA1Q9UHB6 759 aaKnown RBP17.69■□□□□ 0.42
NUP88-207ENST00000573584 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 ABL1P00519 1130 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 CALM1P0DP23 149 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 CALM2P0DP24 149 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 CALM3P0DP25 149 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 FECHP22830 423 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 NUP88Q99567 741 aaPredicted RBP17.69■□□□□ 0.42
NUP88-207ENST00000573584 ABHD10Q9NUJ1 306 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 BTG4Q9NY30 223 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 KAT6BQ8WYB5 2073 aa17.69■□□□□ 0.42
NUP88-207ENST00000573584 GYS2P54840 703 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 ERVK-24P63145 666 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 E2F4Q16254 413 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 RIOK1Q9BRS2 568 aaKnown RBP17.68■□□□□ 0.42
NUP88-207ENST00000573584 RWDD2AQ9UIY3 292 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
NUP88-207ENST00000573584 BCORQ6W2J9 1755 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 CDC25AP30304 524 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 EIF5P55010 431 aaKnown RBP17.68■□□□□ 0.42
NUP88-207ENST00000573584 MCM6Q14566 821 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 BEND6Q5SZJ8 279 aaPredicted RBP17.68■□□□□ 0.42
NUP88-207ENST00000573584 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 ANKRD20A12PQ8NF67 263 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 PNKPQ96T60 521 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 RNF225M0QZC1 329 aaPredicted RBP17.68■□□□□ 0.42
NUP88-207ENST00000573584 GYG1P46976 350 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 DYNLL1P63167 89 aaKnown RBP17.68■□□□□ 0.42
NUP88-207ENST00000573584 TUBB4BP68371 445 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 CYP26C1Q6V0L0 522 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 PIK3AP1Q6ZUJ8 805 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 NAPGQ99747 312 aaPredicted RBP17.68■□□□□ 0.42
NUP88-207ENST00000573584 TAB2Q9NYJ8 693 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 ADAM21Q9UKJ8 722 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 RAB21Q9UL25 225 aa17.68■□□□□ 0.42
NUP88-207ENST00000573584 H3BQF6 201 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 TFRCP02786 760 aaKnown RBP17.67■□□□□ 0.42
NUP88-207ENST00000573584 COPB1P53618 953 aaKnown RBP17.67■□□□□ 0.42
NUP88-207ENST00000573584 SPAG1Q07617 926 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 PAK1Q13153 545 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 PDXDC2PQ6P474 469 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 MSANTD4Q8NCY6 345 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 MTRQ99707 1265 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 ZBTB22O15209 634 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 MCM7P33993 719 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 USP5P45974 858 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 TCP11X2Q5H9J9 407 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 HDXQ7Z353 690 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 SRBD1Q8N5C6 995 aaKnown RBP17.67■□□□□ 0.42
NUP88-207ENST00000573584 NELFBQ8WX92 580 aa17.67■□□□□ 0.42
NUP88-207ENST00000573584 GNL3LQ9NVN8 582 aaKnown RBP17.67■□□□□ 0.42
NUP88-207ENST00000573584 ITGB4P16144 1822 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 GTPBP6O43824 516 aaPredicted RBP17.66■□□□□ 0.42
NUP88-207ENST00000573584 ERLIN1O75477 346 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 NLRP5P59047 1200 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 PYM1Q9BRP8 204 aaKnown RBP17.66■□□□□ 0.42
NUP88-207ENST00000573584 MYH6P13533 1939 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 KCNJ18B7U540 433 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 DDAH1O94760 285 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 RHOXF2BP0C7M4 288 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 KRT9P35527 623 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 KCNJ12Q14500 433 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
NUP88-207ENST00000573584 SLF1Q9BQI6 1058 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 RHOXF2Q9BQY4 288 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 BRIP1Q9BX63 1249 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 MAPK8IP1Q9UQF2 711 aa17.66■□□□□ 0.42
NUP88-207ENST00000573584 CTAGE15A4D2H0 777 aa17.65■□□□□ 0.42
NUP88-207ENST00000573584 CTAGE8P0CG41 777 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms