RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 FMNL1O95466 1100 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-213ENST00000573577 FCGRTP55899 365 aa16.04■□□□□ 0.16
RPAIN-213ENST00000573577 HERVK_113P62684 666 aa16.04■□□□□ 0.16
RPAIN-213ENST00000573577 SIAH1Q8IUQ4 282 aa16.04■□□□□ 0.16
RPAIN-213ENST00000573577 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-213ENST00000573577 SH2D4AQ9H788 454 aa16.04■□□□□ 0.16
RPAIN-213ENST00000573577 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
RPAIN-213ENST00000573577 ARHGEF10LQ9HCE6 1279 aa16.04■□□□□ 0.16
RPAIN-213ENST00000573577 USP17L15C9J2P7 530 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 USP17L13C9JLJ4 530 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 USP17L11C9JVI0 530 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 USP17L18D6R9N7 530 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 USP17L22D6RA61 530 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 USP17L17D6RBQ6 530 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 USP17L19D6RCP7 530 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 USP17L20D6RJB6 530 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 PRMT2P55345 433 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 USP17L24Q0WX57 530 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 P2RX7Q99572 595 aaKnown RBP16.03■□□□□ 0.16
RPAIN-213ENST00000573577 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.03■□□□□ 0.16
RPAIN-213ENST00000573577 TMX2Q9Y320 296 aa16.03■□□□□ 0.16
RPAIN-213ENST00000573577 PRDM1O75626 825 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 EEF2P13639 858 aaKnown RBP16.02■□□□□ 0.16
RPAIN-213ENST00000573577 HOXD10P28358 340 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 NT5C2P49902 561 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 HAND2P61296 217 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 CATSPERGQ6ZRH7 1159 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 MFSD6Q6ZSS7 791 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 GTF3C2Q8WUA4 911 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-213ENST00000573577 RPAP3Q9H6T3 665 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-213ENST00000573577 ANO2Q9NQ90 1003 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 MORF4L1Q9UBU8 362 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 SRRDQ9UH36 339 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 PTCH2Q9Y6C5 1203 aa16.02■□□□□ 0.16
RPAIN-213ENST00000573577 TNPO2O14787 897 aaKnown RBP16.01■□□□□ 0.15
RPAIN-213ENST00000573577 ORC4O43929 436 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 FGRP09769 529 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 TSPY3P0CV98 308 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 TSPY8P0CW00 308 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 ATP2B2Q01814 1243 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 PTH1RQ03431 593 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 PPP4R3BQ5MIZ7 849 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 STAG1Q8WVM7 1258 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 LPAR1Q92633 364 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 MAP4K1Q92918 833 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.01■□□□□ 0.15
RPAIN-213ENST00000573577 GTF3C3Q9Y5Q9 886 aa16.01■□□□□ 0.15
RPAIN-213ENST00000573577 GREB1LQ9C091 1923 aaPredicted RBP16.01■□□□□ 0.15
RPAIN-213ENST00000573577 MYPNQ86TC9 1320 aa16■□□□□ 0.15
RPAIN-213ENST00000573577 TSPY2A6NKD2 308 aa16■□□□□ 0.15
RPAIN-213ENST00000573577 KIAA1755Q5JYT7 1200 aa16■□□□□ 0.15
RPAIN-213ENST00000573577 ARMC5Q96C12 935 aa16■□□□□ 0.15
RPAIN-213ENST00000573577 VCPKMTQ9H867 229 aa16■□□□□ 0.15
RPAIN-213ENST00000573577 TXNRD2Q9NNW7 524 aa16■□□□□ 0.15
RPAIN-213ENST00000573577 RBPJLQ9UBG7 517 aa16■□□□□ 0.15
RPAIN-213ENST00000573577 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
RPAIN-213ENST00000573577 IGKV6D-41A0A0C4DH26 115 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 RANBP6O60518 1105 aaKnown RBP15.99■□□□□ 0.15
RPAIN-213ENST00000573577 PRKCZQ05513 592 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 SLC9C1Q4G0N8 1177 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 RRP12Q5JTH9 1297 aaKnown RBP15.99■□□□□ 0.15
RPAIN-213ENST00000573577 POTEEQ6S8J3 1075 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 LBX2Q6XYB7 198 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 SPICE1Q8N0Z3 855 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 GPRC5AQ8NFJ5 357 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 PAGR1Q9BTK6 254 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 TANGO6Q9C0B7 1094 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 LSG1Q9H089 658 aaKnown RBP15.99■□□□□ 0.15
RPAIN-213ENST00000573577 CNNM2Q9H8M5 875 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 GOPCQ9HD26 462 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 NYAP2Q9P242 653 aa15.99■□□□□ 0.15
RPAIN-213ENST00000573577 SPDYE16A6NNV3 312 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-213ENST00000573577 PEX10O60683 326 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 EIF5BO60841 1220 aaKnown RBP15.98■□□□□ 0.15
RPAIN-213ENST00000573577 REC8O95072 547 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 SOX10P56693 466 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 ERVK-9P63128 1117 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 ERVK-24P63145 666 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 TFAP4Q01664 338 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 TBC1D10CQ8IV04 446 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 NEDD1Q8NHV4 660 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 RAET1EQ8TD07 263 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 ESR2Q92731 530 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 COA7Q96BR5 231 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 RABGAP1Q9Y3P9 1069 aa15.98■□□□□ 0.15
RPAIN-213ENST00000573577 RBM8AQ9Y5S9 174 aaKnown RBP15.98■□□□□ 0.15
RPAIN-213ENST00000573577 MGAMO43451 1857 aa15.97■□□□□ 0.15
RPAIN-213ENST00000573577 WDR46O15213 610 aaKnown RBP15.97■□□□□ 0.15
RPAIN-213ENST00000573577 TRDNQ13061 729 aa15.97■□□□□ 0.15
RPAIN-213ENST00000573577 COG2Q14746 738 aa15.97■□□□□ 0.15
RPAIN-213ENST00000573577 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
RPAIN-213ENST00000573577 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
RPAIN-213ENST00000573577 NBPF11Q86T75 865 aa15.97■□□□□ 0.15
RPAIN-213ENST00000573577 CEP95Q96GE4 821 aa15.97■□□□□ 0.15
RPAIN-213ENST00000573577 ZNF333Q96JL9 665 aa15.97■□□□□ 0.15
RPAIN-213ENST00000573577 KRT23Q9C075 422 aa15.97■□□□□ 0.15
RPAIN-213ENST00000573577 MTMR4Q9NYA4 1195 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms