RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 E2F5Q15329 346 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 ADCK5Q3MIX3 580 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 ANO6Q4KMQ2 910 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 ZNF530Q6P9A1 599 aaPredicted RBP11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 CYB5D1Q6P9G0 228 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 FAM76AQ8TAV0 307 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 MAP4K1Q92918 833 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 EBF2Q9HAK2 575 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 RBM8AQ9Y5S9 174 aaKnown RBP11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 MED23Q9ULK4 1368 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 EIF3HO15372 352 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 PRPF6O94906 941 aaKnown RBP11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 LINGO3P0C6S8 592 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 PDHBP11177 359 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 ARID5BQ14865 1188 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 SKIDA1Q1XH10 827 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 NUGGCQ68CJ6 796 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 LCA5Q86VQ0 697 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 LZICQ8WZA0 190 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 MYO1AQ9UBC5 1043 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 ITGB1BP2Q9UKP3 347 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 KIF1AQ12756 1690 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 RFX7Q2KHR2 1363 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 RGPD5Q99666 1765 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 SMIM24O75264 130 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 NAT2P11245 290 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 PSME1Q06323 249 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 TMEM62Q0P6H9 643 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 ST3GAL1Q11201 340 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 PPFIA1Q13136 1202 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 ME3Q16798 604 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 LONRF3Q496Y0 759 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 AACSQ86V21 672 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 FAM228AQ86W67 206 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 CCDC13Q8IYE1 715 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 LINS1Q8NG48 757 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 TAF4BQ92750 862 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 OSBPL5Q9H0X9 879 aaPredicted RBP11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 NUP62CLQ9H1M0 184 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 HMG20BQ9P0W2 317 aa11.76□□□□□ -0.53
CHRNB1-205ENST00000573209 STRCP1A6NGW2 1772 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 TRPM3Q9HCF6 1732 aaPredicted RBP11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 VPS37CA5D8V6 355 aaPredicted RBP11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 A6NHS1 94 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 RNMTO43148 476 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 MGRN1O60291 552 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 PHACTR2O75167 634 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 KIF4AO95239 1232 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 DDX58O95786 925 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 PARP1P09874 1014 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 CPA1P15085 419 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 CLPPQ16740 277 aaPredicted RBP11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 SLF2Q8IX21 1173 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 MSANTD4Q8NCY6 345 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 TPX2Q9ULW0 747 aaKnown RBP11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 GRM8O00222 908 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 CA8P35219 290 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 PSMD7P51665 324 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 BLMHQ13867 455 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 C1orf141Q5JVX7 400 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 WHAMMQ8TF30 809 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 NSMCE1Q8WV22 266 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 TUBGCP4Q9UGJ1 667 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 GGA2Q9UJY4 613 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 ARFGEF2Q9Y6D5 1785 aa11.75□□□□□ -0.53
CHRNB1-205ENST00000573209 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 KCNQ3O43525 872 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 PENKP01210 267 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 KRT72Q14CN4 511 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 GNPTABQ3T906 1256 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 GJC2Q5T442 439 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 LARP1BQ659C4 914 aaKnown RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 OTUD6AQ7L8S5 288 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 LEO1Q8WVC0 666 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 SPIRE2Q8WWL2 714 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 KAT14Q9H8E8 782 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 ARHGEF10LQ9HCE6 1279 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 BUB1BO60566 1050 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 HDAC4P56524 1084 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 NMIQ13287 307 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 TRIML1Q8N9V2 468 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 RASSF8Q8NHQ8 419 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 LUC7LQ9NQ29 371 aaKnown RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 ZNHIT6Q9NWK9 470 aaKnown RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 TUBA8Q9NY65 449 aaPredicted RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 PAIP2BQ9ULR5 123 aaKnown RBP11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 C15orf41Q9Y2V0 281 aa11.74□□□□□ -0.53
CHRNB1-205ENST00000573209 ABCC6O95255 1503 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 BECN2A8MW95 431 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 BIN1O00499 593 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 ANXA1P04083 346 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 MMEP08473 750 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 ATP4AP20648 1035 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms