RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 RAET1EQ8TD07 263 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 ACER1Q8TDN7 264 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 ARMC5Q96C12 935 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 LNPKQ9C0E8 428 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 EMILIN3Q9NT22 766 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 ARPP21Q9UBL0 812 aaPredicted RBP10.87□□□□□ -0.67
NDE1-207ENST00000573203 STAP2Q9UGK3 403 aa10.87□□□□□ -0.67
NDE1-207ENST00000573203 MYPNQ86TC9 1320 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 CENPFP49454 3210 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 GSG1L2A8MUP6 293 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 M0R2C6 588 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 IGHDP01880 384 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 APPP05067 770 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 HOXA7P31268 230 aaPredicted RBP10.86□□□□□ -0.67
NDE1-207ENST00000573203 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 CDK8P49336 464 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 FAM110CQ1W6H9 321 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 GIMAP6Q6P9H5 292 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 TMEM179Q6ZVK1 233 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 C16orf86Q6ZW13 317 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 SMC5Q8IY18 1101 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 C12orf42Q96LP6 360 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 P2RX7Q99572 595 aaKnown RBP10.86□□□□□ -0.67
NDE1-207ENST00000573203 KIAA1683Q9H0B3 1180 aa10.86□□□□□ -0.67
NDE1-207ENST00000573203 MINDY4BA8MYZ0 360 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 PATL2C9JE40 543 aaKnown RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 SMIM22K7EJ46 135 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 TNPO2O14787 897 aaKnown RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 SNPHO15079 494 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 AKR1B1P15121 316 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 TDO2P48775 406 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 HERVK_113P62684 666 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 PRKCZQ05513 592 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 SBK1Q52WX2 424 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 SH3TC2Q8TF17 1288 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 COA7Q96BR5 231 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 EVI5LQ96CN4 794 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 ZNF333Q96JL9 665 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 CCDC17Q96LX7 622 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 SEC62Q99442 399 aaKnown RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 DOCK3Q8IZD9 2030 aa10.85□□□□□ -0.67
NDE1-207ENST00000573203 RBBP6Q7Z6E9 1792 aaKnown RBP10.85□□□□□ -0.67
NDE1-207ENST00000573203 TNRC18O15417 2968 aaPredicted RBP10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L15C9J2P7 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L13C9JLJ4 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L11C9JVI0 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L18D6R9N7 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L22D6RA61 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L17D6RBQ6 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L19D6RCP7 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L20D6RJB6 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 MYCP01106 439 aaPredicted RBP10.84□□□□□ -0.67
NDE1-207ENST00000573203 VCAM1P19320 739 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 GRK4P32298 578 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 NUCB1Q02818 461 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 ICA1Q05084 483 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 USP17L24Q0WX57 530 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 ZMYM1Q5SVZ6 1142 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 CHD1LQ86WJ1 897 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 STK11IPQ8N1F8 1099 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 NACAP1Q9BZK3 213 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 MKNK2Q9HBH9 465 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 ARHGEF10LQ9HCE6 1279 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 EPB41L4AQ9HCS5 686 aaPredicted RBP10.84□□□□□ -0.67
NDE1-207ENST00000573203 BIN2Q9UBW5 565 aaPredicted RBP10.84□□□□□ -0.67
NDE1-207ENST00000573203 GABRQQ9UN88 632 aa10.84□□□□□ -0.67
NDE1-207ENST00000573203 A0A1W2PRG0 241 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 TRIM6-TRIM34B2RNG4 842 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 FLT3LGP49771 235 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 ATP2B2Q01814 1243 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 CATSPERGQ6ZRH7 1159 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 IFNL3Q8IZI9 196 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 GPRC5AQ8NFJ5 357 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 RILPL2Q969X0 211 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 PAGR1Q9BTK6 254 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 NAPBQ9H115 298 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 RPAP3Q9H6T3 665 aaPredicted RBP10.83□□□□□ -0.68
NDE1-207ENST00000573203 SH2D4AQ9H788 454 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
NDE1-207ENST00000573203 MORF4L1Q9UBU8 362 aa10.83□□□□□ -0.68
NDE1-207ENST00000573203 KIAA0100Q14667 2235 aaKnown RBP10.82□□□□□ -0.68
NDE1-207ENST00000573203 ROBO3Q96MS0 1386 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 PEX10O60683 326 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 ERVK-9P63128 1117 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 ERVK-24P63145 666 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 UBXN2AP68543 259 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 CCDC129Q6ZRS4 1044 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 CLEC10AQ8IUN9 316 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 CCAR1Q8IX12 1150 aaKnown RBP10.82□□□□□ -0.68
NDE1-207ENST00000573203 KANSL2Q9H9L4 492 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 ZNF287Q9HBT7 754 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 TXNRD2Q9NNW7 524 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 RBPJLQ9UBG7 517 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 TMX2Q9Y320 296 aa10.82□□□□□ -0.68
NDE1-207ENST00000573203 RBM19Q9Y4C8 960 aaKnown RBP10.82□□□□□ -0.68
NDE1-207ENST00000573203 ADCY3O60266 1144 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 SLC3A2P08195 630 aaKnown RBP10.81□□□□□ -0.68
NDE1-207ENST00000573203 EEF2P13639 858 aaKnown RBP10.81□□□□□ -0.68
NDE1-207ENST00000573203 RASA1P20936 1047 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms