RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ZCCHC17Q9NP64 241 aaKnown RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 MTMR4Q9NYA4 1195 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 TAOK2Q9UL54 1235 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 A0A0G2JMZ2 1700 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 TSPY2A6NKD2 308 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 ZNF213O14771 459 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 CNMDO75829 334 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 TSPY3P0CV98 308 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 TSPY8P0CW00 308 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 HOXA7P31268 230 aaPredicted RBP8.28□□□□□ -1.08
SMG6-209ENST00000571442 OTUD7BQ6GQQ9 843 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 RCSD1Q6JBY9 416 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 CATSPERGQ6ZRH7 1159 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 CYB5R4Q7L1T6 521 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 CD99L2Q8TCZ2 262 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 RPAP3Q9H6T3 665 aaPredicted RBP8.28□□□□□ -1.08
SMG6-209ENST00000571442 TOMM22Q9NS69 142 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 FBXO28Q9NVF7 368 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 TMOD4Q9NZQ9 345 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 NYAP2Q9P242 653 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 CLIP2Q9UDT6 1046 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 SLC45A1Q9Y2W3 748 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 PLXNB2O15031 1838 aa8.28□□□□□ -1.08
SMG6-209ENST00000571442 SPDYE16A6NNV3 312 aaPredicted RBP8.27□□□□□ -1.09
SMG6-209ENST00000571442 SLC27A2O14975 620 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 FKTNO75072 461 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 KDM4AO75164 1064 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 NDUFB10O96000 172 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 SLC3A2P08195 630 aaKnown RBP8.27□□□□□ -1.09
SMG6-209ENST00000571442 SP3Q02447 781 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 NECTIN1Q15223 517 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 IMMTQ16891 758 aaKnown RBP8.27□□□□□ -1.09
SMG6-209ENST00000571442 Q3C1V9 767 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 NOM1Q5C9Z4 860 aaKnown RBP8.27□□□□□ -1.09
SMG6-209ENST00000571442 FAM83BQ5T0W9 1011 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 MFSD6Q6ZSS7 791 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 RASEFQ8IZ41 740 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 ANKRD13CQ8N6S4 541 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 MKL1Q969V6 931 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 PARK7Q99497 189 aaKnown RBP8.27□□□□□ -1.09
SMG6-209ENST00000571442 SENP2Q9HC62 589 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 ARHGEF10LQ9HCE6 1279 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 ANO2Q9NQ90 1003 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 ZSWIM5Q9P217 1185 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 RBPJLQ9UBG7 517 aa8.27□□□□□ -1.09
SMG6-209ENST00000571442 U3KPZ7 1027 aaPredicted RBP8.27□□□□□ -1.09
SMG6-209ENST00000571442 SMCHD1A6NHR9 2005 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP17L15C9J2P7 530 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP17L13C9JLJ4 530 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP17L11C9JVI0 530 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP17L18D6R9N7 530 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP17L22D6RA61 530 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP17L17D6RBQ6 530 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP17L19D6RCP7 530 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP17L20D6RJB6 530 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 E7EWF7 191 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 F5H6K3 240 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 TTLL1O95922 423 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 OSBPP22059 807 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP14P54578 494 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 ANTXR2P58335 489 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 HERVK_113P62684 666 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 LACTBP83111 547 aaPredicted RBP8.26□□□□□ -1.09
SMG6-209ENST00000571442 KLRC3Q07444 240 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 USP17L24Q0WX57 530 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 CREB3L3Q68CJ9 461 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 CHST3Q7LGC8 479 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 ATG4CQ96DT6 458 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 TMEM47Q9BQJ4 181 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 ZNF287Q9HBT7 754 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
SMG6-209ENST00000571442 TCP11L1Q9NUJ3 509 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 BTBD7Q9P203 1132 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 CTNNA3Q9UI47 895 aa8.26□□□□□ -1.09
SMG6-209ENST00000571442 WDR46O15213 610 aaKnown RBP8.25□□□□□ -1.09
SMG6-209ENST00000571442 RAD21O60216 631 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 TAL1P17542 331 aaPredicted RBP8.25□□□□□ -1.09
SMG6-209ENST00000571442 IRX3P78415 501 aaPredicted RBP8.25□□□□□ -1.09
SMG6-209ENST00000571442 SEC23AQ15436 765 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 ADCK5Q3MIX3 580 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 SLFN13Q68D06 897 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 OTOP1Q7RTM1 612 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 CTU1Q7Z7A3 348 aaKnown RBP8.25□□□□□ -1.09
SMG6-209ENST00000571442 MB21D2Q8IYB1 491 aaPredicted RBP8.25□□□□□ -1.09
SMG6-209ENST00000571442 ENAHQ8N8S7 591 aaPredicted RBP8.25□□□□□ -1.09
SMG6-209ENST00000571442 REPS2Q8NFH8 660 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 SMCR8Q8TEV9 937 aaPredicted RBP8.25□□□□□ -1.09
SMG6-209ENST00000571442 TRIM47Q96LD4 638 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 PAGR1Q9BTK6 254 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 TANGO6Q9C0B7 1094 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 PORCNQ9H237 461 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 RNF41Q9H4P4 317 aaPredicted RBP8.25□□□□□ -1.09
SMG6-209ENST00000571442 MORF4L1Q9UBU8 362 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 GABRQQ9UN88 632 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 STX8Q9UNK0 236 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 MTMR7Q9Y216 660 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 TRIM17Q9Y577 477 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 HTTP42858 3142 aa8.25□□□□□ -1.09
SMG6-209ENST00000571442 FLOT1O75955 427 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms