RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 PTCH2Q9Y6C5 1203 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 CCDC85CA6NKD9 419 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 FMNL1O95466 1100 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 NDUFB10O96000 172 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 OSBPP22059 807 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 FAM83BQ5T0W9 1011 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 STOX1Q6ZVD7 989 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 SMCR8Q8TEV9 937 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 ATG4CQ96DT6 458 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 VCPKMTQ9H867 229 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 KANSL2Q9H9L4 492 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 ZCCHC17Q9NP64 241 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 TOMM22Q9NS69 142 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 PTPN22Q9Y2R2 807 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 LAMB1P07942 1786 aa11.66□□□□□ -0.54
GTF3C1-212ENST00000570129 SPDYE16A6NNV3 312 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 B4E1Z4 1266 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L15C9J2P7 530 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L13C9JLJ4 530 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L11C9JVI0 530 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L18D6R9N7 530 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L22D6RA61 530 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L17D6RBQ6 530 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L19D6RCP7 530 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L20D6RJB6 530 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 F5H6K3 240 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 ORC4O43929 436 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 IRX3P78415 501 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 PRKCZQ05513 592 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 KLRC3Q07444 240 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L24Q0WX57 530 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 CYB5R4Q7L1T6 521 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 ERO1AQ96HE7 468 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 ESYT1Q9BSJ8 1104 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 TANGO6Q9C0B7 1094 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 LSG1Q9H089 658 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 SENP2Q9HC62 589 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 GPHNQ9NQX3 736 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 NYAP2Q9P242 653 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 SLC45A1Q9Y2W3 748 aa11.65□□□□□ -0.54
GTF3C1-212ENST00000570129 CYP21A2P08686 494 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 TSPY3P0CV98 308 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 TSPY8P0CW00 308 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 ELNP15502 786 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 PDE4BQ07343 736 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 TRIM32Q13049 653 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 AKNAD1Q5T1N1 836 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 IFFO2Q5TF58 517 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 TTBK2Q6IQ55 1244 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 CHST3Q7LGC8 479 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 DSCC1Q9BVC3 393 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 TBC1D2Q9BYX2 928 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 ARHGEF10LQ9HCE6 1279 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 GJD2Q9UKL4 321 aa11.64□□□□□ -0.55
GTF3C1-212ENST00000570129 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 HIP1O00291 1037 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 ZNF213O14771 459 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 KDM4AO75164 1064 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 MCCP23508 829 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 DSG3P32926 999 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 USP14P54578 494 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 SOX10P56693 466 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 BMP2KLQ5H9B9 411 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 STAG1Q8WVM7 1258 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 MKL1Q969V6 931 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 CPVLQ9H3G5 476 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 ZSWIM5Q9P217 1185 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 MORF4L1Q9UBU8 362 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 RBM8AQ9Y5S9 174 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 LOC285556D6RIA3 1793 aa11.63□□□□□ -0.55
GTF3C1-212ENST00000570129 FLOT1O75955 427 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 FLT3LGP49771 235 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 ERVK-9P63128 1117 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 ERVK-24P63145 666 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 COG2Q14746 738 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 TMEM132BQ14DG7 1078 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 MTFR1Q15390 333 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 SLFN13Q68D06 897 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 FBXO46Q6PJ61 603 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 MFSD6Q6ZSS7 791 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 KCTD1Q719H9 257 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 TICAM2Q86XR7 235 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 GPRC5AQ8NFJ5 357 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 MAP4K1Q92918 833 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 TMEM47Q9BQJ4 181 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 SRRDQ9UH36 339 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
GTF3C1-212ENST00000570129 GREB1LQ9C091 1923 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 POTEFA5A3E0 1075 aa11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 TTLL1O95922 423 aa11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 SLC3A2P08195 630 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 SLC16A2P36021 539 aa11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 NOVP48745 357 aa11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 PABPC4Q13310 644 aaKnown RBP eCLIP11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 CCL14Q16627 93 aa11.61□□□□□ -0.55
GTF3C1-212ENST00000570129 FAM110CQ1W6H9 321 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms