RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 HSPD1P10809 573 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 VCAM1P19320 739 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 SLC4A3P48751 1232 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 USP14P54578 494 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 TFAP4Q01664 338 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 PDE4BQ07343 736 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 PABPC4Q13310 644 aaKnown RBP eCLIP10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 SH3D19Q5HYK7 790 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 WDR78Q5VTH9 848 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 GIMAP6Q6P9H5 292 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 CENPQQ7L2Z9 268 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 SIAH1Q8IUQ4 282 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 LRRC47Q8N1G4 583 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 TRIM47Q96LD4 638 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 NUP88Q99567 741 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 ZCCHC17Q9NP64 241 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 CLIP2Q9UDT6 1046 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 PTPN22Q9Y2R2 807 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 PTCH2Q9Y6C5 1203 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 ADGRA2Q96PE1 1338 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 TNPO2O14787 897 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 BCRP11274 1271 aa10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 HERVK_113P62684 666 aa10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 FBXO46Q6PJ61 603 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 CCAR1Q8IX12 1150 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 SH3TC2Q8TF17 1288 aa10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 CCDC17Q96LX7 622 aa10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 KIAA1683Q9H0B3 1180 aa10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 CWC22Q9HCG8 908 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 TXNRD2Q9NNW7 524 aa10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 GINM1Q9NU53 330 aa10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 GABRQQ9UN88 632 aa10.72□□□□□ -0.69
GTF3C1-210ENST00000569394 TSPY2A6NKD2 308 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L15C9J2P7 530 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L13C9JLJ4 530 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L11C9JVI0 530 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L18D6R9N7 530 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L22D6RA61 530 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L17D6RBQ6 530 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L19D6RCP7 530 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L20D6RJB6 530 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 MGAMO43451 1857 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 FCGRTP55899 365 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 PRKCZQ05513 592 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L24Q0WX57 530 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 PLS1Q14651 629 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 Q3C1V9 767 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 NOM1Q5C9Z4 860 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 MYPNQ86TC9 1320 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 CEP95Q96GE4 821 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 ZKSCAN3Q9BRR0 538 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 KANSL2Q9H9L4 492 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 FBXO28Q9NVF7 368 aa10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 BIN2Q9UBW5 565 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-210ENST00000569394 MYH4Q9Y623 1939 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 HIP1O00291 1037 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 FLOT1O75955 427 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 CHMLP26374 656 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 MFAP1P55081 439 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 ARHGEF6Q15052 776 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 FAM83BQ5T0W9 1011 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 POTEEQ6S8J3 1075 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 CATSPERGQ6ZRH7 1159 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 RASGRP2Q7LDG7 609 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 TBC1D10CQ8IV04 446 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 NKX2-3Q8TAU0 364 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 RAET1EQ8TD07 263 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 VCPKMTQ9H867 229 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 ZNF287Q9HBT7 754 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 GOPCQ9HD26 462 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 RBPJLQ9UBG7 517 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 STX8Q9UNK0 236 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 SLC45A1Q9Y2W3 748 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 TMX2Q9Y320 296 aa10.7□□□□□ -0.7
GTF3C1-210ENST00000569394 ROBO3Q96MS0 1386 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 ZNF213O14771 459 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 ELNP15502 786 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 CYP2B6P20813 491 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 HOXA7P31268 230 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 GCLCP48506 637 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 PTH1RQ03431 593 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 PKN2Q16513 984 aaKnown RBP10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 SLC9C1Q4G0N8 1177 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 MFSD6Q6ZSS7 791 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 GPRC5AQ8NFJ5 357 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 ATG4CQ96DT6 458 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 PORCNQ9H237 461 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 SH2D4AQ9H788 454 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 BTBD7Q9P203 1132 aa10.69□□□□□ -0.7
GTF3C1-210ENST00000569394 NEDD4P46934 1319 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 F5H6K3 240 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 RIOK3O14730 519 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 CNMDO75829 334 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 HOXD10P28358 340 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 FLT3LGP49771 235 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 ERVK-9P63128 1117 aa10.68□□□□□ -0.7
GTF3C1-210ENST00000569394 ERVK-24P63145 666 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 620.8 ms