RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CNTNAP4Q9C0A0 1308 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 ITGAVP06756 1048 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 NOS3P29474 1203 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 IREB2P48200 963 aaKnown RBP8.26□□□□□ -1.09
UBR1-208ENST00000569066 PPP2R2AP63151 447 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 SNW1Q13573 536 aaKnown RBP8.26□□□□□ -1.09
UBR1-208ENST00000569066 BBS9Q3SYG4 887 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 PRRT3Q5FWE3 981 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 HEATR6Q6AI08 1181 aaKnown RBP8.26□□□□□ -1.09
UBR1-208ENST00000569066 LETMD1Q6P1Q0 360 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 ANKRD34BA5PLL1 514 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 SPDYE3A6NKU9 549 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 NBPF12Q5TAG4 269 aaPredicted RBP8.26□□□□□ -1.09
UBR1-208ENST00000569066 LRRN4CLQ8ND94 238 aa8.26□□□□□ -1.09
UBR1-208ENST00000569066 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.26□□□□□ -1.09
UBR1-208ENST00000569066 hCG_2014768A0A024R1R8 64 aa8.25□□□□□ -1.09
UBR1-208ENST00000569066 GAS2O43903 313 aaKnown RBP8.25□□□□□ -1.09
UBR1-208ENST00000569066 USP11P51784 963 aa8.25□□□□□ -1.09
UBR1-208ENST00000569066 TMEM67Q5HYA8 995 aa8.25□□□□□ -1.09
UBR1-208ENST00000569066 ADAT2Q7Z6V5 191 aaKnown RBP8.25□□□□□ -1.09
UBR1-208ENST00000569066 ZNF227Q86WZ6 799 aa8.25□□□□□ -1.09
UBR1-208ENST00000569066 LRRC47Q8N1G4 583 aaKnown RBP8.25□□□□□ -1.09
UBR1-208ENST00000569066 ZSWIM2Q8NEG5 633 aa8.25□□□□□ -1.09
UBR1-208ENST00000569066 ZNF669Q96BR6 464 aaPredicted RBP8.25□□□□□ -1.09
UBR1-208ENST00000569066 VWCEQ96DN2 955 aa8.25□□□□□ -1.09
UBR1-208ENST00000569066 KREMEN1Q96MU8 473 aa8.25□□□□□ -1.09
UBR1-208ENST00000569066 PSMG3-AS1Q96PY0 264 aa8.25□□□□□ -1.09
UBR1-208ENST00000569066 SPC25Q9HBM1 224 aa8.25□□□□□ -1.09
UBR1-208ENST00000569066 IRS4O14654 1257 aaPredicted RBP8.24□□□□□ -1.09
UBR1-208ENST00000569066 SART1O43290 800 aaKnown RBP8.24□□□□□ -1.09
UBR1-208ENST00000569066 DNAJC6O75061 913 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 LRRN2O75325 713 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 TCEA2Q15560 299 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 FAM126AQ9BYI3 521 aaPredicted RBP8.24□□□□□ -1.09
UBR1-208ENST00000569066 SLKQ9H2G2 1235 aaPredicted RBP8.24□□□□□ -1.09
UBR1-208ENST00000569066 CWC22Q9HCG8 908 aaKnown RBP8.24□□□□□ -1.09
UBR1-208ENST00000569066 PCDH12Q9NPG4 1184 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 LRP2BPQ9P2M1 347 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 PCOLCE2Q9UKZ9 415 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.24□□□□□ -1.09
UBR1-208ENST00000569066 Q6ZS46 218 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 BRF1Q92994 677 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 LENG1Q96BZ8 264 aaPredicted RBP8.24□□□□□ -1.09
UBR1-208ENST00000569066 EPN3Q9H201 632 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 SUGT1Q9Y2Z0 365 aa8.24□□□□□ -1.09
UBR1-208ENST00000569066 RAPGEF3O95398 923 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 MASP1P48740 699 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 MFSD2AQ8NA29 543 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 MINPP1Q9UNW1 487 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 SPATA31C1P0DKV0 1188 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 CD247P20963 164 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 AMPD3Q01432 767 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 AUHQ13825 339 aaKnown RBP8.23□□□□□ -1.09
UBR1-208ENST00000569066 WFDC12Q8WWY7 111 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
UBR1-208ENST00000569066 MEGF10Q96KG7 1140 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 CEP131Q9UPN4 1083 aa8.23□□□□□ -1.09
UBR1-208ENST00000569066 RAB11FIP3O75154 756 aa8.22□□□□□ -1.09
UBR1-208ENST00000569066 SF1Q15637 639 aaKnown RBP8.22□□□□□ -1.09
UBR1-208ENST00000569066 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.22□□□□□ -1.09
UBR1-208ENST00000569066 DHX37Q8IY37 1157 aaKnown RBP8.22□□□□□ -1.09
UBR1-208ENST00000569066 ARMC10Q8N2F6 343 aa8.22□□□□□ -1.09
UBR1-208ENST00000569066 NOP53Q9NZM5 478 aaKnown RBP8.22□□□□□ -1.09
UBR1-208ENST00000569066 BMP3P12645 472 aa8.22□□□□□ -1.09
UBR1-208ENST00000569066 RPUSD2Q8IZ73 545 aaKnown RBP8.22□□□□□ -1.09
UBR1-208ENST00000569066 KISS1RQ969F8 398 aaPredicted RBP8.22□□□□□ -1.09
UBR1-208ENST00000569066 CLUHP3Q96NS8 147 aa8.22□□□□□ -1.09
UBR1-208ENST00000569066 APBA2Q99767 749 aa8.22□□□□□ -1.09
UBR1-208ENST00000569066 MRPS23Q9Y3D9 190 aaKnown RBP8.22□□□□□ -1.09
UBR1-208ENST00000569066 AGRPO00253 132 aa8.21□□□□□ -1.1
UBR1-208ENST00000569066 LEFTY1O75610 366 aa8.21□□□□□ -1.1
UBR1-208ENST00000569066 RXRBP28702 533 aa8.21□□□□□ -1.1
UBR1-208ENST00000569066 MBTPS1Q14703 1052 aa8.21□□□□□ -1.1
UBR1-208ENST00000569066 CDC6Q99741 560 aa8.21□□□□□ -1.1
UBR1-208ENST00000569066 GP6Q9HCN6 339 aa8.21□□□□□ -1.1
UBR1-208ENST00000569066 ADAMTS8Q9UP79 889 aa8.21□□□□□ -1.1
UBR1-208ENST00000569066 NOP58Q9Y2X3 529 aaKnown RBP8.21□□□□□ -1.1
UBR1-208ENST00000569066 IQCA1LA6NCM1 817 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 SEZ6L2Q6UXD5 910 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 TOP6BLQ8N6T0 577 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 BTN2A2Q8WVV5 523 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 SGSM3Q96HU1 749 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 NOL6Q9H6R4 1146 aaKnown RBP8.2□□□□□ -1.1
UBR1-208ENST00000569066 NCOA5Q9HCD5 579 aaKnown RBP8.2□□□□□ -1.1
UBR1-208ENST00000569066 PRDM10Q9NQV6 1147 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 C1GALT1Q9NS00 363 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 ZNF445P59923 1031 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 IGBP1P78318 339 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 PODNQ7Z5L7 613 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 C7orf61Q8IZ16 206 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 SMARCC1Q92922 1105 aaPredicted RBP8.2□□□□□ -1.1
UBR1-208ENST00000569066 UTP4Q969X6 686 aaKnown RBP8.2□□□□□ -1.1
UBR1-208ENST00000569066 AARSD1Q9BTE6 412 aaKnown RBP8.2□□□□□ -1.1
UBR1-208ENST00000569066 IER2Q9BTL4 223 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 PRKAB1Q9Y478 270 aa8.2□□□□□ -1.1
UBR1-208ENST00000569066 PABPC4Q13310 644 aaKnown RBP eCLIP8.19□□□□□ -1.1
UBR1-208ENST00000569066 PPP2R5DQ14738 602 aa8.19□□□□□ -1.1
UBR1-208ENST00000569066 BVESQ8NE79 360 aa8.19□□□□□ -1.1
UBR1-208ENST00000569066 EZH1Q92800 747 aaPredicted RBP8.19□□□□□ -1.1
UBR1-208ENST00000569066 MYRFLQ96LU7 910 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms