RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 SART3Q15020 963 aaKnown RBP19.69■□□□□ 0.74
COMMD4-224ENST00000568877 GADL1Q6ZQY3 521 aa19.69■□□□□ 0.74
COMMD4-224ENST00000568877 DHX32Q7L7V1 743 aaKnown RBP19.69■□□□□ 0.74
COMMD4-224ENST00000568877 LRRC47Q8N1G4 583 aaKnown RBP19.69■□□□□ 0.74
COMMD4-224ENST00000568877 ENAHQ8N8S7 591 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-224ENST00000568877 PROCA1Q8NCQ7 364 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-224ENST00000568877 ANKS1AQ92625 1134 aa19.69■□□□□ 0.74
COMMD4-224ENST00000568877 PTPN18Q99952 460 aa19.69■□□□□ 0.74
COMMD4-224ENST00000568877 TMEM47Q9BQJ4 181 aa19.69■□□□□ 0.74
COMMD4-224ENST00000568877 MTA3Q9BTC8 594 aa19.69■□□□□ 0.74
COMMD4-224ENST00000568877 UPF2Q9HAU5 1272 aaKnown RBP19.69■□□□□ 0.74
COMMD4-224ENST00000568877 ERICH2A1L162 156 aa19.68■□□□□ 0.74
COMMD4-224ENST00000568877 F5H6K3 240 aa19.68■□□□□ 0.74
COMMD4-224ENST00000568877 TOP1P11387 765 aaKnown RBP19.68■□□□□ 0.74
COMMD4-224ENST00000568877 EXOSC10Q01780 885 aaKnown RBP19.68■□□□□ 0.74
COMMD4-224ENST00000568877 KLRC3Q07444 240 aa19.68■□□□□ 0.74
COMMD4-224ENST00000568877 SEC23AQ15436 765 aa19.68■□□□□ 0.74
COMMD4-224ENST00000568877 BLOC1S2Q6QNY1 142 aa19.68■□□□□ 0.74
COMMD4-224ENST00000568877 IFNL1Q8IU54 200 aa19.68■□□□□ 0.74
COMMD4-224ENST00000568877 C22orf23Q9BZE7 217 aa19.68■□□□□ 0.74
COMMD4-224ENST00000568877 TM6SF1Q9BZW5 370 aa19.68■□□□□ 0.74
COMMD4-224ENST00000568877 GOPCQ9HD26 462 aa19.68■□□□□ 0.74
COMMD4-224ENST00000568877 BTBD19C9JJ37 291 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 TMEM67Q5HYA8 995 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 KIAA1755Q5JYT7 1200 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 GPAT2Q6NUI2 795 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 ANKRD23Q86SG2 305 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 GMCL1P1Q8NEA9 526 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 IGDCC4Q8TDY8 1250 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 LPAR1Q92633 364 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 IL17RAQ96F46 866 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 TMEM87BQ96K49 555 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 AGTPBP1Q9UPW5 1226 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 WDR19Q8NEZ3 1342 aa19.67■□□□□ 0.74
COMMD4-224ENST00000568877 THSD7BQ9C0I4 1608 aa19.66■□□□□ 0.74
COMMD4-224ENST00000568877 IGF2BP3O00425 579 aaKnown RBP eCLIP19.66■□□□□ 0.74
COMMD4-224ENST00000568877 RAD21O60216 631 aa19.66■□□□□ 0.74
COMMD4-224ENST00000568877 CPA1P15085 419 aa19.66■□□□□ 0.74
COMMD4-224ENST00000568877 CASTP20810 708 aaKnown RBP19.66■□□□□ 0.74
COMMD4-224ENST00000568877 WTAPQ15007 396 aa19.66■□□□□ 0.74
COMMD4-224ENST00000568877 TREML2Q5T2D2 321 aa19.66■□□□□ 0.74
COMMD4-224ENST00000568877 IFIT1BQ5T764 474 aaKnown RBP19.66■□□□□ 0.74
COMMD4-224ENST00000568877 OTUD7BQ6GQQ9 843 aa19.66■□□□□ 0.74
COMMD4-224ENST00000568877 SPICE1Q8N0Z3 855 aa19.66■□□□□ 0.74
COMMD4-224ENST00000568877 KAT14Q9H8E8 782 aa19.66■□□□□ 0.74
COMMD4-224ENST00000568877 ZSWIM6Q9HCJ5 1215 aa19.66■□□□□ 0.74
COMMD4-224ENST00000568877 NDUFB10O96000 172 aa19.65■□□□□ 0.74
COMMD4-224ENST00000568877 VCAM1P19320 739 aa19.65■□□□□ 0.74
COMMD4-224ENST00000568877 RPS6KB1P23443 525 aa19.65■□□□□ 0.74
COMMD4-224ENST00000568877 RBM25P49756 843 aaKnown RBP19.65■□□□□ 0.74
COMMD4-224ENST00000568877 SLFN13Q68D06 897 aa19.65■□□□□ 0.74
COMMD4-224ENST00000568877 RUFY3Q7L099 469 aa19.65■□□□□ 0.74
COMMD4-224ENST00000568877 FAM43AQ8N2R8 423 aa19.65■□□□□ 0.74
COMMD4-224ENST00000568877 LRRC2Q9BYS8 371 aa19.65■□□□□ 0.74
COMMD4-224ENST00000568877 CYP46A1Q9Y6A2 500 aa19.65■□□□□ 0.74
COMMD4-224ENST00000568877 PDHXO00330 501 aa19.64■□□□□ 0.73
COMMD4-224ENST00000568877 SH2B2O14492 632 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-224ENST00000568877 PABPC4Q13310 644 aaKnown RBP eCLIP19.64■□□□□ 0.73
COMMD4-224ENST00000568877 PNMA1Q8ND90 353 aa19.64■□□□□ 0.73
COMMD4-224ENST00000568877 TCEANC2Q96MN5 208 aa19.64■□□□□ 0.73
COMMD4-224ENST00000568877 RPAP3Q9H6T3 665 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-224ENST00000568877 LY9Q9HBG7 655 aa19.64■□□□□ 0.73
COMMD4-224ENST00000568877 SENP2Q9HC62 589 aa19.64■□□□□ 0.73
COMMD4-224ENST00000568877 ZCCHC17Q9NP64 241 aaKnown RBP19.64■□□□□ 0.73
COMMD4-224ENST00000568877 GPHNQ9NQX3 736 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-224ENST00000568877 SLC45A1Q9Y2W3 748 aa19.64■□□□□ 0.73
COMMD4-224ENST00000568877 PTPRFP10586 1907 aa19.64■□□□□ 0.73
COMMD4-224ENST00000568877 CEP350Q5VT06 3117 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 LOC285556D6RIA3 1793 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 USP17L15C9J2P7 530 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 USP17L13C9JLJ4 530 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 USP17L11C9JVI0 530 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 USP17L18D6R9N7 530 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 USP17L22D6RA61 530 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 USP17L17D6RBQ6 530 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 USP17L19D6RCP7 530 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 USP17L20D6RJB6 530 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 WDR46O15213 610 aaKnown RBP19.63■□□□□ 0.73
COMMD4-224ENST00000568877 ALDH1A1P00352 501 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 HOXA7P31268 230 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-224ENST00000568877 LIFRP42702 1097 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 MAP2K1Q02750 393 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-224ENST00000568877 USP17L24Q0WX57 530 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 TMTC2Q8N394 836 aa19.63■□□□□ 0.73
COMMD4-224ENST00000568877 UPF3BQ9BZI7 483 aaKnown RBP19.63■□□□□ 0.73
COMMD4-224ENST00000568877 FGD1P98174 961 aa19.62■□□□□ 0.73
COMMD4-224ENST00000568877 JMYQ8N9B5 988 aa19.62■□□□□ 0.73
COMMD4-224ENST00000568877 GMCL1Q96IK5 515 aa19.62■□□□□ 0.73
COMMD4-224ENST00000568877 MTMR7Q9Y216 660 aa19.62■□□□□ 0.73
COMMD4-224ENST00000568877 MYH4Q9Y623 1939 aa19.62■□□□□ 0.73
COMMD4-224ENST00000568877 BMP3P12645 472 aa19.61■□□□□ 0.73
COMMD4-224ENST00000568877 OSBPP22059 807 aa19.61■□□□□ 0.73
COMMD4-224ENST00000568877 SLC1A4P43007 532 aa19.61■□□□□ 0.73
COMMD4-224ENST00000568877 FAM83BQ5T0W9 1011 aa19.61■□□□□ 0.73
COMMD4-224ENST00000568877 NFXL1Q6ZNB6 911 aa19.61■□□□□ 0.73
COMMD4-224ENST00000568877 CATSPERGQ6ZRH7 1159 aa19.61■□□□□ 0.73
COMMD4-224ENST00000568877 Q6ZUG5 572 aa19.61■□□□□ 0.73
COMMD4-224ENST00000568877 FBXL16Q8N461 479 aa19.61■□□□□ 0.73
COMMD4-224ENST00000568877 DCAF4Q8WV16 495 aa19.61■□□□□ 0.73
COMMD4-224ENST00000568877 CHMP4CQ96CF2 233 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms