RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 PABPC4Q13310 644 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 SEPT2Q15019 361 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 ACER1Q8TDN7 264 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 KCNB2Q92953 911 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 TRIM44Q96DX7 344 aaPredicted RBP13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 TRIM47Q96LD4 638 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 LSG1Q9H089 658 aaKnown RBP13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 ASCC2Q9H1I8 757 aaPredicted RBP13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 TMOD4Q9NZQ9 345 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 PNMA3Q9UL41 463 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 LOC285556D6RIA3 1793 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 PRPF40AO75400 957 aaKnown RBP13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 OSBPP22059 807 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 USP17L2Q6R6M4 530 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 TICAM2Q86XR7 235 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 AMOTL1Q8IY63 956 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 SMCR8Q8TEV9 937 aaPredicted RBP13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 C12orf42Q96LP6 360 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 TM6SF1Q9BZW5 370 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 KIAA1683Q9H0B3 1180 aa13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 ARPP21Q9UBL0 812 aaPredicted RBP13.61□□□□□ -0.23
SNAPC5-208ENST00000568875 MKI67P46013 3256 aaKnown RBP13.6□□□□□ -0.23
SNAPC5-208ENST00000568875 KIAA0100Q14667 2235 aaKnown RBP13.6□□□□□ -0.23
SNAPC5-208ENST00000568875 ESPNB1AK53 854 aa13.6□□□□□ -0.23
SNAPC5-208ENST00000568875 HS1BP3Q53T59 392 aa13.6□□□□□ -0.23
SNAPC5-208ENST00000568875 SIAH1Q8IUQ4 282 aa13.6□□□□□ -0.23
SNAPC5-208ENST00000568875 CCDC17Q96LX7 622 aa13.6□□□□□ -0.23
SNAPC5-208ENST00000568875 TTC14Q96N46 770 aa13.6□□□□□ -0.23
SNAPC5-208ENST00000568875 EPB41L4AQ9HCS5 686 aaPredicted RBP13.6□□□□□ -0.23
SNAPC5-208ENST00000568875 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 MPHOSPH10O00566 681 aaKnown RBP13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 AKR1B1P15121 316 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 GCLCP48506 637 aaPredicted RBP13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 USP14P54578 494 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 PRMT2P55345 433 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 CAVIN1Q6NZI2 390 aaKnown RBP13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 TMEM179Q6ZVK1 233 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 IFNL3Q8IZI9 196 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 ANKRD13CQ8N6S4 541 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 SNX14Q9Y5W7 946 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 ZSWIM8A7E2V4 1837 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 FMNL1O95466 1100 aaPredicted RBP13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 FAM110CQ1W6H9 321 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 GPT2Q8TD30 523 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 ARMC5Q96C12 935 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 SRRDQ9UH36 339 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 LIMCH1Q9UPQ0 1083 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 PTCH2Q9Y6C5 1203 aa13.59□□□□□ -0.23
SNAPC5-208ENST00000568875 DOCK3Q8IZD9 2030 aa13.58□□□□□ -0.23
SNAPC5-208ENST00000568875 MINDY4BA8MYZ0 360 aa13.58□□□□□ -0.24
SNAPC5-208ENST00000568875 APPP05067 770 aa13.58□□□□□ -0.24
SNAPC5-208ENST00000568875 HOXD10P28358 340 aa13.58□□□□□ -0.24
SNAPC5-208ENST00000568875 SYAP1Q96A49 352 aaPredicted RBP13.58□□□□□ -0.24
SNAPC5-208ENST00000568875 FEZ1Q99689 392 aa13.58□□□□□ -0.24
SNAPC5-208ENST00000568875 IL25Q9H293 177 aa13.58□□□□□ -0.24
SNAPC5-208ENST00000568875 DIAPH3Q9NSV4 1193 aa13.58□□□□□ -0.24
SNAPC5-208ENST00000568875 FOXP2O15409 715 aa13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 NCLP19338 710 aaKnown RBP13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 FCGRTP55899 365 aa13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 HERVK_113P62684 666 aa13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 IRX3P78415 501 aaPredicted RBP13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 ZYXQ15942 572 aaKnown RBP13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 LRSAM1Q6UWE0 723 aa13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 CATSPERGQ6ZRH7 1159 aa13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 TMEM87AQ8NBN3 555 aa13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 ZSCAN31Q96LW9 406 aaPredicted RBP13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 UPF3BQ9BZI7 483 aaKnown RBP13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 HELLSQ9NRZ9 838 aa13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 MORF4L1Q9UBU8 362 aa13.57□□□□□ -0.24
SNAPC5-208ENST00000568875 ROBO3Q96MS0 1386 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 USP17L15C9J2P7 530 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 USP17L13C9JLJ4 530 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 USP17L11C9JVI0 530 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 USP17L18D6R9N7 530 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 USP17L22D6RA61 530 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 USP17L17D6RBQ6 530 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 USP17L19D6RCP7 530 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 USP17L20D6RJB6 530 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 VCAM1P19320 739 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 TDO2P48775 406 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 SOX10P56693 466 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 USP17L24Q0WX57 530 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 VPS53Q5VIR6 699 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 CCDC129Q6ZRS4 1044 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 FAM227BQ96M60 508 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 NACAP1Q9BZK3 213 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 RBPJLQ9UBG7 517 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 TMX2Q9Y320 296 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 MYH8P13535 1937 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 RASA1P20936 1047 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 MCMDC2Q4G0Z9 681 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 NBPF11Q86T75 865 aa13.56□□□□□ -0.24
SNAPC5-208ENST00000568875 ZNF333Q96JL9 665 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms