RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 EXOC5O00471 708 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 CLTAP09496 248 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 ERCC5P28715 1186 aaPredicted RBP12.19□□□□□ -0.46
PALB2-206ENST00000568219 GUCY1A3Q02108 690 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
PALB2-206ENST00000568219 IFIT1BQ5T764 474 aaKnown RBP12.19□□□□□ -0.46
PALB2-206ENST00000568219 KAZALD1Q96I82 304 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 ABHD10Q9NUJ1 306 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
PALB2-206ENST00000568219 TUBE1Q9UJT0 475 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 USP42Q9H9J4 1324 aaKnown RBP12.18□□□□□ -0.46
PALB2-206ENST00000568219 EIF4E1BA6NMX2 242 aaKnown RBP12.18□□□□□ -0.46
PALB2-206ENST00000568219 PPP1R7Q15435 360 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 NBPF14Q5TI25 921 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 TTLL7Q6ZT98 887 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
PALB2-206ENST00000568219 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 CCDC51Q96ER9 411 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 UIMC1Q96RL1 719 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 MED23Q9ULK4 1368 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 KIF4AO95239 1232 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 DEXIO95424 95 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 GUCY1A2P33402 732 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 USP14P54578 494 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 CCDC40Q4G0X9 1142 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 MICAL1Q8TDZ2 1067 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 EPB41L5Q9HCM4 733 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 CD248Q9HCU0 757 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 GDAQ9Y2T3 454 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 TRIM49BA6NDI0 452 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 PTGDRQ13258 359 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 SPTY2D1Q68D10 685 aaPredicted RBP12.18□□□□□ -0.46
PALB2-206ENST00000568219 RRAGAQ7L523 313 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 KSR1Q8IVT5 923 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 TMEM87BQ96K49 555 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 GEMIN8Q9NWZ8 242 aaKnown RBP12.18□□□□□ -0.46
PALB2-206ENST00000568219 LRWD1Q9UFC0 647 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 RIPOR2Q9Y4F9 1068 aa12.18□□□□□ -0.46
PALB2-206ENST00000568219 KRT14P02533 472 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 GCKP35557 465 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 SEC24CP53992 1094 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 TTC38Q5R3I4 469 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 KRT23Q9C075 422 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 BUB1BO60566 1050 aaPredicted RBP12.17□□□□□ -0.46
PALB2-206ENST00000568219 GCP02774 474 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 EVA1CP58658 441 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 NR1I3Q14994 352 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 KRT26Q7Z3Y9 468 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 IFT20Q8IY31 132 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 KIFC2Q96AC6 838 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 TCP11L1Q9NUJ3 509 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 NFU1Q9UMS0 254 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 EFCAB6Q5THR3 1501 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 TTC26A0AVF1 554 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 MOCS3O95396 460 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 VIMP08670 466 aaKnown RBP12.17□□□□□ -0.46
PALB2-206ENST00000568219 CYB5R4Q7L1T6 521 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 TRIML1Q8N9V2 468 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 UHMK1Q8TAS1 419 aaKnown RBP12.17□□□□□ -0.46
PALB2-206ENST00000568219 TCP11Q8WWU5 503 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 HPCAL4Q9UM19 191 aa12.17□□□□□ -0.46
PALB2-206ENST00000568219 GOLGA6L10A0A0M3HER8 536 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 ANKRD18BA2A2Z9 1011 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 NUTM2BA6NNL0 878 aaPredicted RBP12.16□□□□□ -0.46
PALB2-206ENST00000568219 NUTM2EB1AL46 878 aaPredicted RBP12.16□□□□□ -0.46
PALB2-206ENST00000568219 GOLGA8KD6RF30 607 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 PPP1R12BO60237 982 aaPredicted RBP12.16□□□□□ -0.46
PALB2-206ENST00000568219 USP5P45974 858 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 ARFGAP2Q8N6H7 521 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 PAGE5Q96GU1 130 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 RSRC1Q96IZ7 334 aaKnown RBP12.16□□□□□ -0.46
PALB2-206ENST00000568219 LRRC1Q9BTT6 524 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 TEX13AQ9BXU3 409 aaPredicted RBP12.16□□□□□ -0.46
PALB2-206ENST00000568219 INTS13Q9NVM9 706 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 ZSWIM5Q9P217 1185 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 PARP1P09874 1014 aaKnown RBP12.16□□□□□ -0.46
PALB2-206ENST00000568219 PDE4DQ08499 809 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 TRIM14Q14142 442 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 NEDD9Q14511 834 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 FAM184BQ9ULE4 1060 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 CEP83Q9Y592 693 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 SETD1BQ9UPS6 1966 aaKnown RBP12.16□□□□□ -0.46
PALB2-206ENST00000568219 KAT6BQ8WYB5 2073 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 MAP2K7O14733 419 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 GYPCP04921 128 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 TCERG1LQ5VWI1 586 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
PALB2-206ENST00000568219 HNRNPLLQ8WVV9 542 aaKnown RBP12.16□□□□□ -0.46
PALB2-206ENST00000568219 RNF41Q9H4P4 317 aaPredicted RBP12.16□□□□□ -0.46
PALB2-206ENST00000568219 CYP7A1P22680 504 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 KRT12Q99456 494 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 DUSP10Q9Y6W6 482 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 ADGRB1O14514 1584 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
PALB2-206ENST00000568219 GCOM1H8Y6P7 765 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms