RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 LNPKQ9C0E8 428 aa9.5□□□□□ -0.89
SMG1-214ENST00000568038 ANKRD2Q9GZV1 360 aa9.5□□□□□ -0.89
SMG1-214ENST00000568038 NEUROD4Q9HD90 331 aa9.5□□□□□ -0.89
SMG1-214ENST00000568038 DLEC1Q9Y238 1755 aa9.5□□□□□ -0.89
SMG1-214ENST00000568038 LRP5O75197 1615 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 WTIPA6NIX2 430 aaPredicted RBP9.49□□□□□ -0.89
SMG1-214ENST00000568038 PDE8BO95263 885 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 KCNJ4P48050 445 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 TIMM10P62072 90 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 TEAD4Q15561 434 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 TNNI3KQ59H18 835 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 AACSQ86V21 672 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
SMG1-214ENST00000568038 CLASRPQ8N2M8 674 aaKnown RBP9.49□□□□□ -0.89
SMG1-214ENST00000568038 VGLL2Q8N8G2 317 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 NEUROD6Q96NK8 337 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 TFIP11Q9UBB9 837 aaKnown RBP9.49□□□□□ -0.89
SMG1-214ENST00000568038 RBM19Q9Y4C8 960 aaKnown RBP9.49□□□□□ -0.89
SMG1-214ENST00000568038 FPGT-TNNI3KV9GXZ4 949 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 XDHP47989 1333 aa9.49□□□□□ -0.89
SMG1-214ENST00000568038 SERTM1A2A2V5 107 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 UFL1O94874 794 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 IFIT2P09913 472 aaKnown RBP9.48□□□□□ -0.89
SMG1-214ENST00000568038 ATP2B4P23634 1241 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 EPHA4P54764 986 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 FOXK2Q01167 660 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 NUCB1Q02818 461 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 PUM3Q15397 648 aaKnown RBP9.48□□□□□ -0.89
SMG1-214ENST00000568038 ATP2B3Q16720 1220 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 CCDC93Q567U6 631 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 SH3PXD2AQ5TCZ1 1133 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 DPP8Q6V1X1 898 aaPredicted RBP9.48□□□□□ -0.89
SMG1-214ENST00000568038 LRRC69Q6ZNQ3 347 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 CHD1LQ86WJ1 897 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 EAF2Q96CJ1 260 aaPredicted RBP9.48□□□□□ -0.89
SMG1-214ENST00000568038 GPR101Q96P66 508 aaPredicted RBP9.48□□□□□ -0.89
SMG1-214ENST00000568038 CCDC8Q9H0W5 538 aaPredicted RBP9.48□□□□□ -0.89
SMG1-214ENST00000568038 POLLQ9UGP5 575 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 AKAP2Q9Y2D5 859 aa9.48□□□□□ -0.89
SMG1-214ENST00000568038 A0A1B0GUL7 405 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 SFI1A8K8P3 1242 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 IFIT1P09914 478 aaKnown RBP9.47□□□□□ -0.89
SMG1-214ENST00000568038 SLC5A1P13866 664 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 FGFR2P21802 821 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 UBE4AQ14139 1066 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 SOGA3Q5TF21 947 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 SKAP1Q86WV1 359 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 RTKN2Q8IZC4 609 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 TBC1D16Q8TBP0 767 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 OTUD7AQ8TE49 926 aaPredicted RBP9.47□□□□□ -0.89
SMG1-214ENST00000568038 LPIN2Q92539 896 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 TSPAN10Q9H1Z9 355 aaPredicted RBP9.47□□□□□ -0.89
SMG1-214ENST00000568038 GPR108Q9NPR9 543 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 TLR7Q9NYK1 1049 aaKnown RBP9.47□□□□□ -0.89
SMG1-214ENST00000568038 PODXL2Q9NZ53 605 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 HCN2Q9UL51 889 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 MKL2Q9ULH7 1088 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 PRR12Q9ULL5 1215 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 LEMD3Q9Y2U8 911 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 HCN4Q9Y3Q4 1203 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 ZNF804BA4D1E1 1349 aa9.47□□□□□ -0.89
SMG1-214ENST00000568038 BRCA1P38398 1863 aaKnown RBP9.47□□□□□ -0.89
SMG1-214ENST00000568038 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
SMG1-214ENST00000568038 ARAFP10398 606 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 YBX3P16989 372 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMG1-214ENST00000568038 KLRK1P26718 216 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 ADORA1P30542 326 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 GPR162Q16538 588 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 GORABQ5T7V8 394 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 SLCO4C1Q6ZQN7 724 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 ARHGAP27Q6ZUM4 889 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 DBNDD2Q9BQY9 259 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 ZNF609O15014 1411 aa9.46□□□□□ -0.9
SMG1-214ENST00000568038 LRRC37AA6NMS7 1700 aa9.45□□□□□ -0.9
SMG1-214ENST00000568038 RASA1P20936 1047 aa9.45□□□□□ -0.9
SMG1-214ENST00000568038 GYG1P46976 350 aa9.45□□□□□ -0.9
SMG1-214ENST00000568038 PCBP4P57723 403 aaKnown RBP9.45□□□□□ -0.9
SMG1-214ENST00000568038 TXNRD3Q86VQ6 643 aa9.45□□□□□ -0.9
SMG1-214ENST00000568038 TSEN2Q8NCE0 465 aaKnown RBP9.45□□□□□ -0.9
SMG1-214ENST00000568038 SUPT20HQ8NEM7 779 aa9.45□□□□□ -0.9
SMG1-214ENST00000568038 BTBD6Q96KE9 485 aa9.45□□□□□ -0.9
SMG1-214ENST00000568038 CALR3Q96L12 384 aaKnown RBP9.45□□□□□ -0.9
SMG1-214ENST00000568038 EYA3Q99504 573 aa9.45□□□□□ -0.9
SMG1-214ENST00000568038 ZNF277Q9NRM2 450 aaPredicted RBP9.45□□□□□ -0.9
SMG1-214ENST00000568038 MARK1Q9P0L2 795 aa9.45□□□□□ -0.9
SMG1-214ENST00000568038 DBNLQ9UJU6 430 aaKnown RBP9.45□□□□□ -0.9
SMG1-214ENST00000568038 EPXP11678 715 aa9.44□□□□□ -0.9
SMG1-214ENST00000568038 PHKA1P46020 1223 aa9.44□□□□□ -0.9
SMG1-214ENST00000568038 RGS3P49796 1198 aa9.44□□□□□ -0.9
SMG1-214ENST00000568038 FKBP4Q02790 459 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMG1-214ENST00000568038 AOC3Q16853 763 aa9.44□□□□□ -0.9
SMG1-214ENST00000568038 CAVIN4Q5BKX8 364 aa9.44□□□□□ -0.9
SMG1-214ENST00000568038 TSHZ3Q63HK5 1081 aa9.44□□□□□ -0.9
SMG1-214ENST00000568038 VPS37DQ86XT2 251 aa9.44□□□□□ -0.9
SMG1-214ENST00000568038 FAM84BQ96KN1 310 aaPredicted RBP9.44□□□□□ -0.9
SMG1-214ENST00000568038 PSMD1Q99460 953 aa9.44□□□□□ -0.9
SMG1-214ENST00000568038 RTFDC1Q9BY42 306 aaPredicted RBP9.44□□□□□ -0.9
SMG1-214ENST00000568038 ZC3H12CQ9C0D7 883 aaKnown RBP9.44□□□□□ -0.9
SMG1-214ENST00000568038 TAOK3Q9H2K8 898 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms