RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 TMEM201Q5SNT2 666 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 GOLM1Q8NBJ4 401 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 PDZD8Q8NEN9 1154 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 BAHD1Q8TBE0 780 aaPredicted RBP6.06□□□□□ -1.44
CDH1-211ENST00000567320 RNF141Q8WVD5 230 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 CCDC74BQ96LY2 380 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 KREMEN1Q96MU8 473 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 TMEM74Q96NL1 305 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 RNF32Q9H0A6 362 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 FAM221AA4D161 298 aa6.05□□□□□ -1.44
CDH1-211ENST00000567320 HTR3BO95264 441 aa6.05□□□□□ -1.44
CDH1-211ENST00000567320 PWP1Q13610 501 aa6.05□□□□□ -1.44
CDH1-211ENST00000567320 CIAPIN1Q6FI81 312 aa6.05□□□□□ -1.44
CDH1-211ENST00000567320 TMEM132EQ6IEE7 984 aa6.05□□□□□ -1.44
CDH1-211ENST00000567320 SLFN12Q8IYM2 578 aa6.05□□□□□ -1.44
CDH1-211ENST00000567320 SLC26A8Q96RN1 970 aa6.05□□□□□ -1.44
CDH1-211ENST00000567320 FITM1A5D6W6 292 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 ETV2O00321 342 aaPredicted RBP6.04□□□□□ -1.44
CDH1-211ENST00000567320 TLR3O15455 904 aaKnown RBP6.04□□□□□ -1.44
CDH1-211ENST00000567320 ZGLP1P0C6A0 271 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 SRFP11831 508 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 PDE6BP35913 854 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 ITGAEP38570 1179 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 KCNA10Q16322 511 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 SPPL2CQ8IUH8 684 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 KIF2CQ99661 725 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 ASPNQ9BXN1 380 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 GPR160Q9UJ42 338 aa6.04□□□□□ -1.44
CDH1-211ENST00000567320 SSU72P8A0A1W2PR75 194 aa6.03□□□□□ -1.44
CDH1-211ENST00000567320 NUAK1O60285 661 aa6.03□□□□□ -1.44
CDH1-211ENST00000567320 DUSP4Q13115 394 aa6.03□□□□□ -1.44
CDH1-211ENST00000567320 LCNL1Q6ZST4 164 aa6.03□□□□□ -1.44
CDH1-211ENST00000567320 ZNF605Q86T29 641 aa6.03□□□□□ -1.44
CDH1-211ENST00000567320 LILRA2Q8N149 483 aa6.03□□□□□ -1.44
CDH1-211ENST00000567320 RSRP1Q9BUV0 290 aa6.03□□□□□ -1.44
CDH1-211ENST00000567320 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
CDH1-211ENST00000567320 SLC6A17Q9H1V8 727 aa6.03□□□□□ -1.44
CDH1-211ENST00000567320 SHISA3A0PJX4 238 aa6.02□□□□□ -1.45
CDH1-211ENST00000567320 KRT1P04264 644 aa6.02□□□□□ -1.45
CDH1-211ENST00000567320 RPL10P27635 214 aaKnown RBP6.02□□□□□ -1.45
CDH1-211ENST00000567320 TAGLNQ01995 201 aaKnown RBP6.02□□□□□ -1.45
CDH1-211ENST00000567320 TIGD5Q53EQ6 642 aa6.02□□□□□ -1.45
CDH1-211ENST00000567320 DNAJC14Q6Y2X3 702 aaPredicted RBP6.02□□□□□ -1.45
CDH1-211ENST00000567320 CILP2Q8IUL8 1156 aa6.02□□□□□ -1.45
CDH1-211ENST00000567320 FBXO27Q8NI29 283 aa6.02□□□□□ -1.45
CDH1-211ENST00000567320 RHOVQ96L33 236 aa6.02□□□□□ -1.45
CDH1-211ENST00000567320 ZMYM5Q9UJ78 669 aa6.02□□□□□ -1.45
CDH1-211ENST00000567320 SMG5Q9UPR3 1016 aaKnown RBP6.02□□□□□ -1.45
CDH1-211ENST00000567320 POLR3KQ9Y2Y1 108 aaPredicted RBP6.02□□□□□ -1.45
CDH1-211ENST00000567320 RAG1P15918 1043 aa6.01□□□□□ -1.45
CDH1-211ENST00000567320 CHRNEQ04844 493 aa6.01□□□□□ -1.45
CDH1-211ENST00000567320 MPP2Q14168 576 aa6.01□□□□□ -1.45
CDH1-211ENST00000567320 CWF19L2Q2TBE0 894 aaKnown RBP6.01□□□□□ -1.45
CDH1-211ENST00000567320 REC114Q7Z4M0 266 aa6.01□□□□□ -1.45
CDH1-211ENST00000567320 FBXO33Q7Z6M2 555 aa6.01□□□□□ -1.45
CDH1-211ENST00000567320 C1QL4Q86Z23 238 aa6.01□□□□□ -1.45
CDH1-211ENST00000567320 SIAH1Q8IUQ4 282 aa6.01□□□□□ -1.45
CDH1-211ENST00000567320 SIRT2Q8IXJ6 389 aa6.01□□□□□ -1.45
CDH1-211ENST00000567320 CWC22Q9HCG8 908 aaKnown RBP6.01□□□□□ -1.45
CDH1-211ENST00000567320 KBTBD4Q9NVX7 518 aa6.01□□□□□ -1.45
CDH1-211ENST00000567320 PRR36Q9H6K5 1346 aa6□□□□□ -1.45
CDH1-211ENST00000567320 GLDCP23378 1020 aa6□□□□□ -1.45
CDH1-211ENST00000567320 GALK1P51570 392 aa6□□□□□ -1.45
CDH1-211ENST00000567320 RNF4P78317 190 aa6□□□□□ -1.45
CDH1-211ENST00000567320 NMIQ13287 307 aaPredicted RBP6□□□□□ -1.45
CDH1-211ENST00000567320 ARSHQ5FYA8 562 aa6□□□□□ -1.45
CDH1-211ENST00000567320 LCE4AQ5TA78 99 aa6□□□□□ -1.45
CDH1-211ENST00000567320 FAM196AQ6ZSG2 479 aa6□□□□□ -1.45
CDH1-211ENST00000567320 IRF2BP1Q8IU81 584 aa6□□□□□ -1.45
CDH1-211ENST00000567320 ANKS4BQ8N8V4 417 aa6□□□□□ -1.45
CDH1-211ENST00000567320 INTS4Q96HW7 963 aaKnown RBP6□□□□□ -1.45
CDH1-211ENST00000567320 IRF2BPLQ9H1B7 796 aa6□□□□□ -1.45
CDH1-211ENST00000567320 CD320Q9NPF0 282 aa6□□□□□ -1.45
CDH1-211ENST00000567320 RBM47A0AV96 593 aaKnown RBP5.99□□□□□ -1.45
CDH1-211ENST00000567320 DNAJA2O60884 412 aa5.99□□□□□ -1.45
CDH1-211ENST00000567320 MED14OSP0DP75 135 aa5.99□□□□□ -1.45
CDH1-211ENST00000567320 LINC00310P59036 64 aa5.99□□□□□ -1.45
CDH1-211ENST00000567320 TEKQ02763 1124 aa5.99□□□□□ -1.45
CDH1-211ENST00000567320 SLC14A2Q15849 920 aa5.99□□□□□ -1.45
CDH1-211ENST00000567320 WAPLQ7Z5K2 1190 aa5.99□□□□□ -1.45
CDH1-211ENST00000567320 YBX2Q9Y2T7 364 aaKnown RBP5.99□□□□□ -1.45
CDH1-211ENST00000567320 PCDHB14Q9Y5E9 798 aa5.99□□□□□ -1.45
CDH1-211ENST00000567320 RGS13O14921 159 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 PSPNO60542 156 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 FKTNO75072 461 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 NR0B2Q15466 257 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 CCDC27Q2M243 656 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 LILRA6Q6PI73 481 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 FOXP3Q9BZS1 431 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 MCOLN1Q9GZU1 580 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 BCL11AQ9H165 835 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 SP110Q9HB58 689 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 BRMS1Q9HCU9 246 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 COPRSQ9NQ92 184 aa5.98□□□□□ -1.45
CDH1-211ENST00000567320 SUPT16HQ9Y5B9 1047 aaKnown RBP5.98□□□□□ -1.45
CDH1-211ENST00000567320 SLC22A31A6NKX4 558 aa5.97□□□□□ -1.45
CDH1-211ENST00000567320 USP2O75604 605 aaPredicted RBP5.97□□□□□ -1.45
CDH1-211ENST00000567320 MCM4P33991 863 aa5.97□□□□□ -1.45
CDH1-211ENST00000567320 EIF4A3P38919 411 aaKnown RBP5.97□□□□□ -1.45
CDH1-211ENST00000567320 PCBP3P57721 371 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms