RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 CCDC87Q9NVE4 849 aa16.14■□□□□ 0.17
CDH1-209ENST00000566510 NLRP5P59047 1200 aa16.14■□□□□ 0.17
CDH1-209ENST00000566510 RSRC2Q7L4I2 434 aaKnown RBP16.14■□□□□ 0.17
CDH1-209ENST00000566510 BCORQ6W2J9 1755 aa16.14■□□□□ 0.17
CDH1-209ENST00000566510 USP17L12C9JPN9 530 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 USP17L21D6R901 530 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 MFAP3LO75121 409 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 FXR1P51114 621 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDH1-209ENST00000566510 FUT2Q10981 343 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 SMC1AQ14683 1233 aaKnown RBP16.13■□□□□ 0.17
CDH1-209ENST00000566510 FAM47AQ5JRC9 791 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 NUP88Q99567 741 aaPredicted RBP16.13■□□□□ 0.17
CDH1-209ENST00000566510 NAA15Q9BXJ9 866 aaKnown RBP16.13■□□□□ 0.17
CDH1-209ENST00000566510 RBM28Q9NW13 759 aaKnown RBP16.13■□□□□ 0.17
CDH1-209ENST00000566510 BMP15O95972 392 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 OAS2P29728 719 aaKnown RBP16.13■□□□□ 0.17
CDH1-209ENST00000566510 CDC25AP30304 524 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 TXLNAP40222 546 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 EVX2Q03828 476 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 TROAPQ12815 778 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 CDKAL1Q5VV42 579 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 INTS5Q6P9B9 1019 aaKnown RBP16.13■□□□□ 0.17
CDH1-209ENST00000566510 SH3RF1Q7Z6J0 888 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 IQUBQ8NA54 791 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 ACRBPQ8NEB7 543 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 CTCFLQ8NI51 663 aaPredicted RBP16.13■□□□□ 0.17
CDH1-209ENST00000566510 ANAPC4Q9UJX5 808 aa16.13■□□□□ 0.17
CDH1-209ENST00000566510 PES1O00541 588 aaKnown RBP16.12■□□□□ 0.17
CDH1-209ENST00000566510 GYPCP04921 128 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 CAVIN4Q5BKX8 364 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 CNGA4Q8IV77 575 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 RIOK1Q9BRS2 568 aaKnown RBP16.12■□□□□ 0.17
CDH1-209ENST00000566510 PARP10Q53GL7 1025 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 CDC5LQ99459 802 aaKnown RBP16.12■□□□□ 0.17
CDH1-209ENST00000566510 ABCA3Q99758 1704 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 CALM1P0DP23 149 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 CALM2P0DP24 149 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 CALM3P0DP25 149 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 CYP2C19P33261 490 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 KRT31Q15323 416 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 SRBD1Q8N5C6 995 aaKnown RBP16.12■□□□□ 0.17
CDH1-209ENST00000566510 TAB2Q9NYJ8 693 aa16.12■□□□□ 0.17
CDH1-209ENST00000566510 XDHP47989 1333 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 ZNF335Q9H4Z2 1342 aaPredicted RBP16.11■□□□□ 0.17
CDH1-209ENST00000566510 LRP5O75197 1615 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 ATP8B1O43520 1251 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 CT47A1Q5JQC4 288 aaPredicted RBP16.11■□□□□ 0.17
CDH1-209ENST00000566510 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 TMTC3Q6ZXV5 915 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 SRGAP1Q7Z6B7 1085 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 ANKRD18AQ8IVF6 992 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 ANKRD20A12PQ8NF67 263 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 RASSF8Q8NHQ8 419 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 CTAGE9A4FU28 777 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 NTSR2O95665 410 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 ABL1P00519 1130 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 TFRCP02786 760 aaKnown RBP16.11■□□□□ 0.17
CDH1-209ENST00000566510 VEGFAP15692 232 aaPredicted RBP16.11■□□□□ 0.17
CDH1-209ENST00000566510 PBX1P40424 430 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 ATP2C1P98194 919 aaPredicted RBP16.11■□□□□ 0.17
CDH1-209ENST00000566510 SLC35F6Q8N357 371 aa16.11■□□□□ 0.17
CDH1-209ENST00000566510 GYS2P54840 703 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 ST5P78524 1137 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 LONRF2Q1L5Z9 754 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 NEK11Q8NG66 645 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 CDC23Q9UJX2 597 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
CDH1-209ENST00000566510 PAK1Q13153 545 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 MCM6Q14566 821 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 BICDL1Q6ZP65 573 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 NELFBQ8WX92 580 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 MTMR7Q9Y216 660 aa16.1■□□□□ 0.17
CDH1-209ENST00000566510 TAF1P21675 1872 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 RHOXF2BP0C7M4 288 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 SCG2P13521 617 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 NPY5RQ15761 445 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 CEP112Q8N8E3 955 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 SLF1Q9BQI6 1058 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 RHOXF2Q9BQY4 288 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 FUT8Q9BYC5 575 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.09■□□□□ 0.17
CDH1-209ENST00000566510 CNTNAP5Q8WYK1 1306 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 ADAMTS3O15072 1205 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 FAM193AP78312 1265 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 UBXN1Q04323 297 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 TNFRSF25Q93038 417 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 ABHD10Q9NUJ1 306 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 JAG2Q9Y219 1238 aa16.09■□□□□ 0.17
CDH1-209ENST00000566510 TSPY2A6NKD2 308 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 KCNJ18B7U540 433 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 RNF225M0QZC1 329 aaPredicted RBP16.08■□□□□ 0.16
CDH1-209ENST00000566510 SEMA3EO15041 775 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 DDAH1O94760 285 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 KRT9P35527 623 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 COPB1P53618 953 aaKnown RBP16.08■□□□□ 0.16
CDH1-209ENST00000566510 ERVK-24P63145 666 aa16.08■□□□□ 0.16
CDH1-209ENST00000566510 KCNJ12Q14500 433 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms