RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 KARSQ15046 597 aaKnown RBP24.47■■□□□ 1.51
SPSB3-208ENST00000566339 FAM182BQ5T319 152 aa24.47■■□□□ 1.51
SPSB3-208ENST00000566339 PHF20Q9BVI0 1012 aa24.47■■□□□ 1.51
SPSB3-208ENST00000566339 TRAPPC10P48553 1259 aa24.46■■□□□ 1.51
SPSB3-208ENST00000566339 TDO2P48775 406 aa24.46■■□□□ 1.51
SPSB3-208ENST00000566339 CCDC85AQ96PX6 553 aaPredicted RBP24.46■■□□□ 1.51
SPSB3-208ENST00000566339 DESI2Q9BSY9 194 aa24.46■■□□□ 1.51
SPSB3-208ENST00000566339 ANKZF1Q9H8Y5 726 aa24.46■■□□□ 1.51
SPSB3-208ENST00000566339 RREB1Q92766 1687 aa24.46■■□□□ 1.51
SPSB3-208ENST00000566339 CICQ96RK0 1608 aaPredicted RBP24.45■■□□□ 1.51
SPSB3-208ENST00000566339 PPP1R3GB7ZBB8 358 aa24.45■■□□□ 1.5
SPSB3-208ENST00000566339 RPS6KA5O75582 802 aa24.45■■□□□ 1.5
SPSB3-208ENST00000566339 MCM3P25205 808 aa24.45■■□□□ 1.5
SPSB3-208ENST00000566339 CYP26C1Q6V0L0 522 aa24.45■■□□□ 1.5
SPSB3-208ENST00000566339 ESR2Q92731 530 aa24.45■■□□□ 1.5
SPSB3-208ENST00000566339 NAPGQ99747 312 aaPredicted RBP24.45■■□□□ 1.5
SPSB3-208ENST00000566339 UBAC1Q9BSL1 405 aa24.45■■□□□ 1.5
SPSB3-208ENST00000566339 CABP5Q9NP86 173 aa24.45■■□□□ 1.5
SPSB3-208ENST00000566339 RWDD2AQ9UIY3 292 aa24.45■■□□□ 1.5
SPSB3-208ENST00000566339 LAMB2P55268 1798 aa24.45■■□□□ 1.5
SPSB3-208ENST00000566339 TEX33O43247 280 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 NR5A1Q13285 461 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 SEC23AQ15436 765 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 ZNF827Q17R98 1081 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 ARMT1Q9H993 441 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 RMND1Q9NWS8 449 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 L1RE1Q9UN81 338 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 TACC3Q9Y6A5 838 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 GTF2E1P29083 439 aaPredicted RBP24.44■■□□□ 1.5
SPSB3-208ENST00000566339 KIF4BQ2VIQ3 1234 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 ZNF662Q6ZS27 426 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 ADAM21Q9UKJ8 722 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 SLC4A4Q9Y6R1 1079 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 THSD7AQ9UPZ6 1657 aa24.44■■□□□ 1.5
SPSB3-208ENST00000566339 IVLP07476 585 aa24.43■■□□□ 1.5
SPSB3-208ENST00000566339 CYP19A1P11511 503 aaPredicted RBP24.43■■□□□ 1.5
SPSB3-208ENST00000566339 HLFQ16534 295 aa24.43■■□□□ 1.5
SPSB3-208ENST00000566339 ZNF569Q5MCW4 686 aa24.43■■□□□ 1.5
SPSB3-208ENST00000566339 TMEM51Q9NW97 253 aa24.43■■□□□ 1.5
SPSB3-208ENST00000566339 TRMT112Q9UI30 125 aaKnown RBP24.43■■□□□ 1.5
SPSB3-208ENST00000566339 CTAGE15A4D2H0 777 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 CTAGE8P0CG41 777 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 RASGRF1Q13972 1273 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 MTF1Q14872 753 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 WDR93Q6P2C0 686 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 CTAGE6Q86UF2 777 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 CCDC125Q86Z20 511 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 CTAGE4Q8IX94 777 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 UBE2Q2LH0YL09 131 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 GYPCP04921 128 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 ATP2C1P98194 919 aaPredicted RBP24.42■■□□□ 1.5
SPSB3-208ENST00000566339 PPARAQ07869 468 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 ZSCAN26Q16670 478 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 BARGINQ6ZT62 677 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 GRAMD1CQ8IYS0 662 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 EPC1Q9H2F5 836 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 VIPAS39Q9H9C1 493 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 LZTFL1Q9NQ48 299 aa24.42■■□□□ 1.5
SPSB3-208ENST00000566339 GTPBP6O43824 516 aaPredicted RBP24.41■■□□□ 1.5
SPSB3-208ENST00000566339 CD44P16070 742 aaKnown RBP24.41■■□□□ 1.5
SPSB3-208ENST00000566339 NT5C2P49902 561 aa24.41■■□□□ 1.5
SPSB3-208ENST00000566339 ST5P78524 1137 aa24.41■■□□□ 1.5
SPSB3-208ENST00000566339 HSP90AA4PQ58FG1 418 aa24.41■■□□□ 1.5
SPSB3-208ENST00000566339 OXER1Q8TDS5 423 aa24.41■■□□□ 1.5
SPSB3-208ENST00000566339 SYMPKQ92797 1274 aaKnown RBP24.41■■□□□ 1.5
SPSB3-208ENST00000566339 RPGRIP1Q96KN7 1286 aa24.41■■□□□ 1.5
SPSB3-208ENST00000566339 SLC4A9Q96Q91 983 aa24.41■■□□□ 1.5
SPSB3-208ENST00000566339 MED4Q9NPJ6 270 aa24.41■■□□□ 1.5
SPSB3-208ENST00000566339 DOT1LQ8TEK3 1739 aa24.41■■□□□ 1.5
SPSB3-208ENST00000566339 DDAH1O94760 285 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 CASP14P31944 242 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 ACTN2P35609 894 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 FUT2Q10981 343 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 PTPN21Q16825 1174 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 ZNF34Q8IZ26 560 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 SYNE4Q8N205 404 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 FAM71BQ8TC56 605 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 SEC31BQ9NQW1 1179 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 ABHD10Q9NUJ1 306 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 PODXL2Q9NZ53 605 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 MYH6P13533 1939 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 SRCAPQ6ZRS2 3230 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 DLEC1Q9Y238 1755 aa24.4■■□□□ 1.5
SPSB3-208ENST00000566339 PKN1Q16512 942 aa24.39■■□□□ 1.5
SPSB3-208ENST00000566339 USP49Q70CQ1 688 aa24.39■■□□□ 1.5
SPSB3-208ENST00000566339 NEK11Q8NG66 645 aa24.39■■□□□ 1.5
SPSB3-208ENST00000566339 TNFRSF25Q93038 417 aa24.39■■□□□ 1.5
SPSB3-208ENST00000566339 THRAP3Q9Y2W1 955 aaKnown RBP24.39■■□□□ 1.5
SPSB3-208ENST00000566339 ZNF330Q9Y3S2 320 aaPredicted RBP24.39■■□□□ 1.5
SPSB3-208ENST00000566339 FGRP09769 529 aa24.39■■□□□ 1.49
SPSB3-208ENST00000566339 RAD51AP2Q09MP3 1159 aa24.39■■□□□ 1.49
SPSB3-208ENST00000566339 CATIPQ7Z7H3 387 aa24.39■■□□□ 1.49
SPSB3-208ENST00000566339 SLC35F6Q8N357 371 aa24.39■■□□□ 1.49
SPSB3-208ENST00000566339 LCORLQ8N3X6 602 aa24.39■■□□□ 1.49
SPSB3-208ENST00000566339 INCENPQ9NQS7 918 aa24.39■■□□□ 1.49
SPSB3-208ENST00000566339 A0A087X0B3 334 aa24.38■■□□□ 1.49
SPSB3-208ENST00000566339 IL6STP40189 918 aaPredicted RBP24.38■■□□□ 1.49
SPSB3-208ENST00000566339 COPB1P53618 953 aaKnown RBP24.38■■□□□ 1.49
SPSB3-208ENST00000566339 E2F4Q16254 413 aa24.38■■□□□ 1.49
SPSB3-208ENST00000566339 RRP12Q5JTH9 1297 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms