RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 TOB2Q14106 344 aaPredicted RBP17.34■□□□□ 0.37
SPG7-213ENST00000566221 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 SGMS1Q86VZ5 419 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 ZNF280CQ8ND82 737 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 BRF1Q92994 677 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 MKL1Q969V6 931 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 OPTNQ96CV9 577 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 HHIPL1Q96JK4 782 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
SPG7-213ENST00000566221 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.34■□□□□ 0.37
SPG7-213ENST00000566221 TMX2Q9Y320 296 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 ZHX2Q9Y6X8 837 aa17.34■□□□□ 0.37
SPG7-213ENST00000566221 AK2P54819 239 aa17.33■□□□□ 0.36
SPG7-213ENST00000566221 SIAH1Q8IUQ4 282 aa17.33■□□□□ 0.36
SPG7-213ENST00000566221 LRRC47Q8N1G4 583 aaKnown RBP17.33■□□□□ 0.36
SPG7-213ENST00000566221 PNMA1Q8ND90 353 aa17.33■□□□□ 0.36
SPG7-213ENST00000566221 ACER1Q8TDN7 264 aa17.33■□□□□ 0.36
SPG7-213ENST00000566221 KIAA1683Q9H0B3 1180 aa17.33■□□□□ 0.36
SPG7-213ENST00000566221 GOPCQ9HD26 462 aa17.33■□□□□ 0.36
SPG7-213ENST00000566221 AFG3L2Q9Y4W6 797 aa17.33■□□□□ 0.36
SPG7-213ENST00000566221 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 TRIM75PA6NK02 468 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 USP17L10C9JJH3 530 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 ZBTB48P10074 688 aaPredicted RBP17.32■□□□□ 0.36
SPG7-213ENST00000566221 ECE1P42892 770 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 USP14P54578 494 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 SPP2Q13103 211 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 MTMR2Q13614 643 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 RGMBQ6NW40 437 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 CATIPQ7Z7H3 387 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 GMCL1P1Q8NEA9 526 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 WNK4Q96J92 1243 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 KCNH4Q9UQ05 1017 aa17.32■□□□□ 0.36
SPG7-213ENST00000566221 KLF18A0A0U1RQI7 1052 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 CCDC85CA6NKD9 419 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 DDAH1O94760 285 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 ZNF157P51786 506 aaPredicted RBP17.31■□□□□ 0.36
SPG7-213ENST00000566221 RCAN1P53805 252 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 BACE1P56817 501 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 APOBRQ0VD83 1088 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 APOA5Q6Q788 366 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 SYNE3Q6ZMZ3 975 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 RASAL3Q86YV0 1011 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 ZNF654Q8IZM8 581 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 VCPKMTQ9H867 229 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
SPG7-213ENST00000566221 CXCL11O14625 94 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 IRF6O14896 467 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 CALM1P0DP23 149 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 CALM2P0DP24 149 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 CALM3P0DP25 149 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 MCM2P49736 904 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 EVCP57679 992 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 ZYXQ15942 572 aaKnown RBP17.3■□□□□ 0.36
SPG7-213ENST00000566221 SPRYD7Q5W111 196 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 LPAR1Q92633 364 aa17.3■□□□□ 0.36
SPG7-213ENST00000566221 NID2Q14112 1375 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 GOLGA8BA8MQT2 603 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 ZBTB43O43298 467 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 SLC10A3P09131 477 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 GJA5P36382 358 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 VEGFBP49765 207 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 SNAPC2Q13487 334 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 SH3D19Q5HYK7 790 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 GMCL1Q96IK5 515 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 C12orf42Q96LP6 360 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 TMOD4Q9NZQ9 345 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 BRPF3Q9ULD4 1205 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 NAP1L2Q9ULW6 460 aaPredicted RBP17.29■□□□□ 0.36
SPG7-213ENST00000566221 RLFQ13129 1914 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 THSD7BQ9C0I4 1608 aa17.29■□□□□ 0.36
SPG7-213ENST00000566221 BAZ2BQ9UIF8 2168 aaKnown RBP17.28■□□□□ 0.36
SPG7-213ENST00000566221 A0A0G2JLL6 359 aaPredicted RBP17.28■□□□□ 0.36
SPG7-213ENST00000566221 RASSF10A6NK89 507 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 F5H6K3 240 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 RAD21O60216 631 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 NDUFB10O96000 172 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 HMGCS2P54868 508 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 KLRC3Q07444 240 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 TROAPQ12815 778 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 NOL8Q76FK4 1167 aaKnown RBP17.28■□□□□ 0.36
SPG7-213ENST00000566221 PRRT2Q7Z6L0 340 aaPredicted RBP17.28■□□□□ 0.36
SPG7-213ENST00000566221 MICU3Q86XE3 530 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 DCAF4Q8WV16 495 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 CCDC102AQ96A19 550 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 ZNF274Q96GC6 653 aaPredicted RBP17.28■□□□□ 0.36
SPG7-213ENST00000566221 MAP3K14Q99558 947 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 LIMCH1Q9UPQ0 1083 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 MTMR7Q9Y216 660 aa17.28■□□□□ 0.36
SPG7-213ENST00000566221 COL11A1P12107 1806 aaPredicted RBP17.27■□□□□ 0.36
SPG7-213ENST00000566221 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.36
SPG7-213ENST00000566221 SNHG28P0DPA3 235 aa17.27■□□□□ 0.36
SPG7-213ENST00000566221 PDHBP11177 359 aa17.27■□□□□ 0.36
SPG7-213ENST00000566221 GTF2A2P52657 109 aa17.27■□□□□ 0.36
SPG7-213ENST00000566221 SLFN13Q68D06 897 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms