RNA–Protein interactions for RNA: ENST00000564969.5

FANCA-217, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 850 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-217ENST00000564969 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
FANCA-217ENST00000564969 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
FANCA-217ENST00000564969 AS3MTQ9HBK9 375 aa13.19□□□□□ -0.3
FANCA-217ENST00000564969 TMX2Q9Y320 296 aa13.19□□□□□ -0.3
FANCA-217ENST00000564969 NID2Q14112 1375 aa13.19□□□□□ -0.3
FANCA-217ENST00000564969 LAMB1P07942 1786 aa13.18□□□□□ -0.3
FANCA-217ENST00000564969 CDKL5O76039 1030 aa13.18□□□□□ -0.3
FANCA-217ENST00000564969 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
FANCA-217ENST00000564969 PRKG1Q13976 671 aa13.18□□□□□ -0.3
FANCA-217ENST00000564969 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
FANCA-217ENST00000564969 GRM4Q14833 912 aa13.18□□□□□ -0.3
FANCA-217ENST00000564969 SHROOM1Q2M3G4 852 aaPredicted RBP13.18□□□□□ -0.3
FANCA-217ENST00000564969 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
FANCA-217ENST00000564969 ANKRD13AQ8IZ07 590 aa13.18□□□□□ -0.3
FANCA-217ENST00000564969 GMCL1P1Q8NEA9 526 aa13.18□□□□□ -0.3
FANCA-217ENST00000564969 ZKSCAN4Q969J2 545 aaPredicted RBP13.18□□□□□ -0.3
FANCA-217ENST00000564969 MYL10Q9BUA6 226 aa13.18□□□□□ -0.3
FANCA-217ENST00000564969 WDR18Q9BV38 432 aa13.18□□□□□ -0.3
FANCA-217ENST00000564969 FAM217BQ9NTX9 383 aaPredicted RBP13.18□□□□□ -0.3
FANCA-217ENST00000564969 CSADQ9Y600 493 aa13.18□□□□□ -0.3
FANCA-217ENST00000564969 SSC5DA1L4H1 1573 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
FANCA-217ENST00000564969 F5H6K3 240 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 TRAF5O00463 557 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
FANCA-217ENST00000564969 SNHG28P0DPA3 235 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 PTPRAP18433 802 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 RXRAP19793 462 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 SMARCA1P28370 1054 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 ADD1P35611 737 aaKnown RBP13.17□□□□□ -0.3
FANCA-217ENST00000564969 HMGN5P82970 282 aaKnown RBP13.17□□□□□ -0.3
FANCA-217ENST00000564969 KLRC3Q07444 240 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 ST3GAL1Q11201 340 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 LDLRAD1Q5T700 205 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 NCOA5Q9HCD5 579 aaKnown RBP13.17□□□□□ -0.3
FANCA-217ENST00000564969 GOPCQ9HD26 462 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
FANCA-217ENST00000564969 A0A1W2PRG0 241 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
FANCA-217ENST00000564969 IFNAR1P17181 557 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 CDC27P30260 824 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 USP14P54578 494 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 NTRK3Q16288 839 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 ASPRV1Q53RT3 343 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 GPATCH4Q5T3I0 446 aaKnown RBP13.16□□□□□ -0.3
FANCA-217ENST00000564969 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
FANCA-217ENST00000564969 C2orf69Q8N8R5 385 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 ZNF280CQ8ND82 737 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 SMARCC2Q8TAQ2 1214 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 ACER1Q8TDN7 264 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 KIF3AQ9Y496 699 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
FANCA-217ENST00000564969 C19orf81C9J6K1 198 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 USP17L10C9JJH3 530 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 KIF3CO14782 793 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 CTDNEP1O95476 244 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 PDHBP11177 359 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 PPATQ06203 517 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 VGLL4Q14135 290 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 ERO1BQ86YB8 467 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 SPRYD3Q8NCJ5 442 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 NSUN7Q8NE18 718 aaKnown RBP13.15□□□□□ -0.3
FANCA-217ENST00000564969 VCPKMTQ9H867 229 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 GBA2Q9HCG7 927 aaPredicted RBP13.15□□□□□ -0.3
FANCA-217ENST00000564969 MAD2L2Q9UI95 211 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 SNCAIPQ9Y6H5 919 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 SIPA1L1O43166 1804 aa13.15□□□□□ -0.3
FANCA-217ENST00000564969 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 UBE2Q2LH0YL09 131 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 TOMM70O94826 608 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
FANCA-217ENST00000564969 ECE1P42892 770 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 SLC1A4P43007 532 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 BACE1P56817 501 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 SSRP1Q08945 709 aaKnown RBP13.14□□□□□ -0.31
FANCA-217ENST00000564969 ZNF543Q08ER8 600 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 SPP2Q13103 211 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 USP17L2Q6R6M4 530 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 SMC1BQ8NDV3 1235 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
FANCA-217ENST00000564969 LPAR1Q92633 364 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 FEZ1Q99689 392 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 ZNF408Q9H9D4 720 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
FANCA-217ENST00000564969 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
FANCA-217ENST00000564969 PTPDC1A2A3K4 754 aa13.13□□□□□ -0.31
FANCA-217ENST00000564969 SPDYE5A6NIY4 337 aa13.13□□□□□ -0.31
FANCA-217ENST00000564969 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
FANCA-217ENST00000564969 FMNL1O95466 1100 aaPredicted RBP13.13□□□□□ -0.31
FANCA-217ENST00000564969 NDUFB10O96000 172 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms