RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	GMCL1P1	Q8NEA9	526 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	CHMP4C	Q96CF2	233 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	WDR18	Q9BV38	432 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	SLK	Q9H2G2	1235 aa	Predicted RBP	11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	SH2D4A	Q9H788	454 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	ARHGEF10L	Q9HCE6	1279 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	SNCAIP	Q9Y6H5	919 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	CCDC196	A0A1B0GTZ2	297 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778		A0A1W2PRG0	241 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	USP17L5	A8MUK1	530 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	PTPRA	P18433	802 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	RTN1	Q16799	776 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	LDLRAD1	Q5T700	205 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	ARMC9	Q7Z3E5	817 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	CCDC83	Q8IWF9	413 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	ANKRD13A	Q8IZ07	590 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	LRRC47	Q8N1G4	583 aa	Known RBP	11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	NECAB1	Q8N987	351 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	FANCB	Q8NB91	859 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	LLPH	Q9BRT6	129 aa	Known RBP	11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	MYL10	Q9BUA6	226 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	PICK1	Q9NRD5	415 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	RBM28	Q9NW13	759 aa	Known RBP	11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	CLIP2	Q9UDT6	1046 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	FZD1	Q9UP38	647 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	TMX2	Q9Y320	296 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	CSAD	Q9Y600	493 aa		11.49	□□□□□ -0.57
SIN3A-205	ENST00000564778	PTPRF	P10586	1907 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	PCNT	O95613	3336 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	DHX16	O60231	1041 aa	Known RBP	11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	PDHB	P11177	359 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	RXRA	P19793	462 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	CDC27	P30260	824 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	KIF5B	P33176	963 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	STK3	Q13188	491 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	JMY	Q8N9B5	988 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	CTCFL	Q8NI51	663 aa	Predicted RBP	11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	SMARCC2	Q8TAQ2	1214 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	ACER1	Q8TDN7	264 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	NUP133	Q8WUM0	1156 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	DCAF4	Q8WV16	495 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	GMCL1	Q96IK5	515 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	KIAA1683	Q9H0B3	1180 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	AS3MT	Q9HBK9	375 aa		11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	NCOA5	Q9HCD5	579 aa	Known RBP	11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.48	□□□□□ -0.57
SIN3A-205	ENST00000564778	LOC285556	D6RIA3	1793 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	STK36	Q9NRP7	1315 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	PALM3	A6NDB9	673 aa	Predicted RBP	11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	SPDYE5	A6NIY4	337 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	CDKL5	O76039	1030 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	CELF2	O95319	508 aa	Known RBP	11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	CTDNEP1	O95476	244 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	NDUFB10	O96000	172 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	ECE1	P42892	770 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	CCT2	P78371	535 aa	Known RBP	11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	ATP2B2	Q01814	1243 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	FMR1	Q06787	632 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	ZNF543	Q08ER8	600 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	PRKG1	Q13976	671 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	NTRK3	Q16288	839 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	ASPRV1	Q53RT3	343 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	TMTC3	Q6ZXV5	915 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	RAB11FIP4	Q86YS3	637 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	ZNF280C	Q8ND82	737 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	NSUN7	Q8NE18	718 aa	Known RBP	11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	C12orf42	Q96LP6	360 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	VCPKMT	Q9H867	229 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	GBA2	Q9HCG7	927 aa	Predicted RBP	11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	GOPC	Q9HD26	462 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	MAD2L2	Q9UI95	211 aa		11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	ABT1	Q9ULW3	272 aa	Known RBP	11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.47	□□□□□ -0.57
SIN3A-205	ENST00000564778	CNTNAP5	Q8WYK1	1306 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778		F5H6K3	240 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	CPLX1	O14810	134 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	PARP1	P09874	1014 aa	Known RBP	11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	IFNAR1	P17181	557 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	SMARCA1	P28370	1054 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	ADD1	P35611	737 aa	Known RBP	11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	GNAQ	P50148	359 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	USP14	P54578	494 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	BACE1	P56817	501 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	HMGN5	P82970	282 aa	Known RBP	11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	PPAT	Q06203	517 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	KLRC3	Q07444	240 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	FUT2	Q10981	343 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	TTLL12	Q14166	644 aa	Predicted RBP	11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	GPATCH4	Q5T3I0	446 aa	Known RBP	11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	SLFN13	Q68D06	897 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	CPLX2	Q6PUV4	134 aa	Known RBP	11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	MOB2	Q70IA6	237 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	RASGRP2	Q7LDG7	609 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	CCDC84	Q86UT8	332 aa	Predicted RBP	11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	ERO1B	Q86YB8	467 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	CCDC144CP	Q8IYA2	1237 aa		11.46	□□□□□ -0.57
SIN3A-205	ENST00000564778	LPAR1	Q92633	364 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms