RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 NPC1L1Q9UHC9 1359 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 RASA4BC9J798 803 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 FYB1O15117 783 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 CLASP2O75122 1294 aaKnown RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 RTN2O75298 545 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 CYP1A2P05177 515 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 KRT18P05783 430 aaKnown RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 PMS2P54278 862 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 DDR1Q08345 913 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 GKAP1Q5VSY0 366 aaPredicted RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 TSHZ3Q63HK5 1081 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 PDXDC1Q6P996 788 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 PPP1R21Q6ZMI0 780 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 SRRTQ9BXP5 876 aaKnown RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 MAPK8IP1Q9UQF2 711 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 C2CD2Q9Y426 696 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 TTLL3Q9Y4R7 772 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 RTEL1-TNFRSF6BF6WH68 1400 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 A2ML1A8K2U0 1454 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 PLXNC1O60486 1568 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 PFDN1O60925 122 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 TMCC1O94876 653 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 CSPG5O95196 566 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 FGAP02671 866 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 PPP2R5CQ13362 524 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 PSMD6Q15008 389 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 FAM133BQ5BKY9 247 aaKnown RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 BICDL1Q6ZP65 573 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 MIS18AQ9NYP9 233 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 MED1Q15648 1581 aaPredicted RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 CEP170BQ9Y4F5 1589 aaPredicted RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 RPRD2Q5VT52 1461 aaKnown RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 C19orf81C9J6K1 198 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 IFRD1O00458 451 aaPredicted RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 BIN1O00499 593 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 TADA3O75528 432 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 KRT13P13646 458 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 HOXC13P31276 330 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 CENPAP49450 140 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 MRPS35P82673 323 aaKnown RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 DR1Q01658 176 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 FAPQ12884 760 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 CEP128Q6ZU80 1094 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 ZNF713Q8N859 430 aaPredicted RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 TBC1D20Q96BZ9 403 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 C8orf48Q96LL4 319 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 GORASP1Q9BQQ3 440 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 PAPOLBQ9NRJ5 636 aaKnown RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 SPTLC3Q9NUV7 552 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 AATFQ9NY61 560 aaKnown RBP eCLIP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 ZNF148Q9UQR1 794 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 INO80Q9ULG1 1556 aaPredicted RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 SPDYE3A6NKU9 549 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 NDUFB5O43674 189 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 DNAJC8O75937 253 aaPredicted RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 TUBA4AP68366 448 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 NLRP9Q7RTR0 991 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 RAB11FIP4Q86YS3 637 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 NLGN1Q8N2Q7 840 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 TRIM58Q8NG06 486 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 PCDH18Q9HCL0 1135 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 ZNF330Q9Y3S2 320 aaPredicted RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 NDC80O14777 642 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 ORC4O43929 436 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 TSPAN1O60635 241 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 APLFQ8IW19 511 aaPredicted RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 BICC1Q9H694 974 aaKnown RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 AVENQ9NQS1 362 aaPredicted RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 SLAIN2Q9P270 581 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 TCOF1Q13428 1488 aaKnown RBP6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 NLRP1Q9C000 1473 aa6.61□□□□□ -1.35
TUBGCP4-207ENST00000563963 TRIM64A6NGJ6 449 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 TRIM64BA6NI03 449 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 ATP6V1E1P36543 226 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 CETN2P41208 172 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 TUFMP49411 452 aaKnown RBP6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 ZNF445P59923 1031 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 AKAP17AQ02040 695 aaKnown RBP6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 WASHC4Q2M389 1173 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 ZNF772Q68DY9 489 aaPredicted RBP6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 MAATS1Q7Z4T9 603 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 CEP112Q8N8E3 955 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 IPCEF1Q8WWN9 437 aaPredicted RBP6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 CLIP3Q96DZ5 547 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 RPGRIP1Q96KN7 1286 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 TCP11L1Q9NUJ3 509 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 RASA4O43374 803 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 MYL3P08590 195 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 BCRP11274 1271 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 CD9P21926 228 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 SLC8A1P32418 973 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 GNL1P36915 607 aaPredicted RBP6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 PPIDQ08752 370 aaKnown RBP6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 KCNB1Q14721 858 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 ANKRD1Q15327 319 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 CFAP157Q5JU67 520 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 C9orf131Q5VYM1 1079 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 NUGGCQ68CJ6 796 aa6.6□□□□□ -1.35
TUBGCP4-207ENST00000563963 LILRB2Q8N423 598 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms