RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 SALL3Q9BXA9 1300 aa20.92■□□□□ 0.94
MAP1LC3B-204ENST00000563720 A0A1W2PRG0 241 aa20.91■□□□□ 0.94
MAP1LC3B-204ENST00000563720 VCAM1P19320 739 aa20.91■□□□□ 0.94
MAP1LC3B-204ENST00000563720 HDAC1Q13547 482 aaPredicted RBP20.91■□□□□ 0.94
MAP1LC3B-204ENST00000563720 CTR9Q6PD62 1173 aa20.91■□□□□ 0.94
MAP1LC3B-204ENST00000563720 TMEM179Q6ZVK1 233 aa20.91■□□□□ 0.94
MAP1LC3B-204ENST00000563720 GPRC5AQ8NFJ5 357 aa20.91■□□□□ 0.94
MAP1LC3B-204ENST00000563720 DDRGK1Q96HY6 314 aa20.91■□□□□ 0.94
MAP1LC3B-204ENST00000563720 A0A0G2JMZ2 1700 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 PFASO15067 1338 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L15C9J2P7 530 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L13C9JLJ4 530 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L11C9JVI0 530 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L18D6R9N7 530 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L22D6RA61 530 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L17D6RBQ6 530 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L19D6RCP7 530 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L20D6RJB6 530 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 ERC2O15083 957 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 GLRX3O76003 335 aaKnown RBP20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 ZFYP08048 801 aaPredicted RBP20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 AKR1B1P15121 316 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 MX1P20591 662 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 CDK8P49336 464 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 USP17L24Q0WX57 530 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 MAP3K21Q5TCX8 1036 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 CATSPERGQ6ZRH7 1159 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 C16orf86Q6ZW13 317 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 AMOTL1Q8IY63 956 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 GTF3C2Q8WUA4 911 aaPredicted RBP20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 SOCS4Q8WXH5 440 aa20.9■□□□□ 0.94
MAP1LC3B-204ENST00000563720 MYH4Q9Y623 1939 aa20.89■□□□□ 0.93
MAP1LC3B-204ENST00000563720 GSG1L2A8MUP6 293 aa20.89■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ERVK-9P63128 1117 aa20.89■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ERVK-24P63145 666 aa20.89■□□□□ 0.93
MAP1LC3B-204ENST00000563720 Q3C1V9 767 aa20.89■□□□□ 0.93
MAP1LC3B-204ENST00000563720 TRMT44Q8IYL2 757 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ARPP21Q9UBL0 812 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3B-204ENST00000563720 COL11A1P12107 1806 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 A0A0C4DFX4 3053 aa20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 M0R2C6 588 aa20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 XRCC5P13010 732 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ZKSCAN1P17029 563 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ANKRD45Q5TZF3 282 aa20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 CLEC10AQ8IUN9 316 aa20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 SIAH1Q8IUQ4 282 aa20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 CCAR1Q8IX12 1150 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 CCDC17Q96LX7 622 aa20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 PAGR1Q9BTK6 254 aa20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 RPAP3Q9H6T3 665 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3B-204ENST00000563720 GPAA1O43292 621 aa20.87■□□□□ 0.93
MAP1LC3B-204ENST00000563720 CNMDO75829 334 aa20.87■□□□□ 0.93
MAP1LC3B-204ENST00000563720 SBK1Q52WX2 424 aa20.87■□□□□ 0.93
MAP1LC3B-204ENST00000563720 GIMAP6Q6P9H5 292 aa20.87■□□□□ 0.93
MAP1LC3B-204ENST00000563720 MAPK4P31152 587 aa20.86■□□□□ 0.93
MAP1LC3B-204ENST00000563720 MDM2Q00987 491 aaPredicted RBP20.86■□□□□ 0.93
MAP1LC3B-204ENST00000563720 CACNB2Q08289 660 aaPredicted RBP20.86■□□□□ 0.93
MAP1LC3B-204ENST00000563720 AAMPQ13685 434 aa20.86■□□□□ 0.93
MAP1LC3B-204ENST00000563720 KIAA1755Q5JYT7 1200 aa20.86■□□□□ 0.93
MAP1LC3B-204ENST00000563720 LBX2Q6XYB7 198 aa20.86■□□□□ 0.93
MAP1LC3B-204ENST00000563720 PORCNQ9H237 461 aa20.86■□□□□ 0.93
MAP1LC3B-204ENST00000563720 EPB41L4AQ9HCS5 686 aaPredicted RBP20.86■□□□□ 0.93
MAP1LC3B-204ENST00000563720 RABGAP1Q9Y3P9 1069 aa20.86■□□□□ 0.93
MAP1LC3B-204ENST00000563720 SPDYE16A6NNV3 312 aaPredicted RBP20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 COL6A1P12109 1028 aa20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ICA1Q05084 483 aa20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 LRRC26Q2I0M4 334 aa20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 LRRFIP1Q32MZ4 808 aaKnown RBP20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 SEC62Q99442 399 aaKnown RBP20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 FSD1Q9BTV5 496 aa20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ARHGEF10LQ9HCE6 1279 aa20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ZBTB47Q9UFB7 747 aaPredicted RBP20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 TMX2Q9Y320 296 aa20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ROBO3Q96MS0 1386 aa20.85■□□□□ 0.93
MAP1LC3B-204ENST00000563720 GNAT2P19087 354 aa20.84■□□□□ 0.93
MAP1LC3B-204ENST00000563720 CCND3P30281 292 aaPredicted RBP20.84■□□□□ 0.93
MAP1LC3B-204ENST00000563720 RGS2P41220 211 aa20.84■□□□□ 0.93
MAP1LC3B-204ENST00000563720 CWC22Q9HCG8 908 aaKnown RBP20.84■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ZNFX1Q9P2E3 1918 aaKnown RBP20.84■□□□□ 0.93
MAP1LC3B-204ENST00000563720 MINDY4BA8MYZ0 360 aa20.83■□□□□ 0.93
MAP1LC3B-204ENST00000563720 CCL14Q16627 93 aa20.83■□□□□ 0.93
MAP1LC3B-204ENST00000563720 ZMYM1Q5SVZ6 1142 aa20.83■□□□□ 0.93
MAP1LC3B-204ENST00000563720 GPR142Q7Z601 462 aa20.83■□□□□ 0.93
MAP1LC3B-204ENST00000563720 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.83■□□□□ 0.93
MAP1LC3B-204ENST00000563720 BTBD7Q9P203 1132 aa20.83■□□□□ 0.93
MAP1LC3B-204ENST00000563720 PATL2C9JE40 543 aaKnown RBP20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 EEF2P13639 858 aaKnown RBP20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 PDE1AP54750 535 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 MORN1Q5T089 497 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 LHX8Q68G74 356 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 PLEKHH3Q7Z736 793 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 IFNL3Q8IZI9 196 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 LPAR1Q92633 364 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 USP6NLQ92738 828 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 APBA2Q99767 749 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 COL25A1Q9BXS0 654 aaPredicted RBP20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 TANGO6Q9C0B7 1094 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 SH2D4AQ9H788 454 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 VCPKMTQ9H867 229 aa20.82■□□□□ 0.92
MAP1LC3B-204ENST00000563720 KANSL2Q9H9L4 492 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms