RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 COL9A1P20849 921 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 POLR2BP30876 1174 aaKnown RBP5.5□□□□□ -1.53
SMG1-207ENST00000563235 PRPHP41219 470 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 KIF22Q14807 665 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 ASIC2Q16515 512 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 DDR2Q16832 855 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 KIAA0319Q5VV43 1072 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 PADI6Q6TGC4 694 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 SYAP1Q96A49 352 aaPredicted RBP5.5□□□□□ -1.53
SMG1-207ENST00000563235 C1orf74Q96LT6 269 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 MRPL9Q9BYD2 267 aaKnown RBP5.5□□□□□ -1.53
SMG1-207ENST00000563235 SCHIP1Q9P0W5 487 aaPredicted RBP5.5□□□□□ -1.53
SMG1-207ENST00000563235 PDP2Q9P2J9 529 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 PRKAG3Q9UGI9 489 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.5□□□□□ -1.53
SMG1-207ENST00000563235 ZHX1Q9UKY1 873 aaPredicted RBP5.5□□□□□ -1.53
SMG1-207ENST00000563235 CFAP45Q9UL16 551 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 BLOC1S6Q9UL45 172 aa5.5□□□□□ -1.53
SMG1-207ENST00000563235 TOP2AP11388 1531 aaKnown RBP5.5□□□□□ -1.53
SMG1-207ENST00000563235 ANO9A1A5B4 782 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 MAP3K6O95382 1288 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 PARP1P09874 1014 aaKnown RBP5.49□□□□□ -1.53
SMG1-207ENST00000563235 FDX1P10109 184 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 NEFHP12036 1026 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 MUTP22033 750 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 NLRP12P59046 1061 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 TBX2Q13207 712 aaPredicted RBP5.49□□□□□ -1.53
SMG1-207ENST00000563235 VWA3BQ502W6 1294 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 CFAP58Q5T655 872 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 CCDC81Q6ZN84 652 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 TAX1BP1Q86VP1 789 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 ERC1Q8IUD2 1116 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 PASD1Q8IV76 773 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 TMEM151BQ8IW70 566 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 ZNF75CPQ92670 426 aaPredicted RBP5.49□□□□□ -1.53
SMG1-207ENST00000563235 BHMTQ93088 406 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 RBM33Q96EV2 1170 aaKnown RBP5.49□□□□□ -1.53
SMG1-207ENST00000563235 CEP95Q96GE4 821 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 ALPK1Q96QP1 1244 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 SPON2Q9BUD6 331 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 KLHL11Q9NVR0 708 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 MAPK8IP1Q9UQF2 711 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 PLB1Q6P1J6 1458 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 COL17A1Q9UMD9 1497 aaPredicted RBP5.49□□□□□ -1.53
SMG1-207ENST00000563235 MUSKO15146 869 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 FAM13AO94988 1023 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 KIF20AO95235 890 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 CASP7P55210 303 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 MRPS35P82673 323 aaKnown RBP5.49□□□□□ -1.53
SMG1-207ENST00000563235 KCNC4Q03721 635 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 EIF2B5Q13144 721 aaKnown RBP5.49□□□□□ -1.53
SMG1-207ENST00000563235 C10orf76Q5T2E6 689 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 CEP68Q76N32 757 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 SH3RF1Q7Z6J0 888 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 NAXEQ8NCW5 288 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 NINJ1Q92982 152 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 NAA15Q9BXJ9 866 aaKnown RBP5.49□□□□□ -1.53
SMG1-207ENST00000563235 RASSF1Q9NS23 344 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 TMOD4Q9NZQ9 345 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 C6orf203Q9P0P8 240 aaPredicted RBP5.49□□□□□ -1.53
SMG1-207ENST00000563235 C2CD2Q9Y426 696 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 SOGA1O94964 1423 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 KDM2BQ8NHM5 1336 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 KIF21BO75037 1637 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 ABCA5Q8WWZ7 1642 aa5.49□□□□□ -1.53
SMG1-207ENST00000563235 FAM221AA4D161 298 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 GSG1L2A8MUP6 293 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 TMF1P82094 1093 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 PLIN5Q00G26 463 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 EN1Q05925 392 aaPredicted RBP5.48□□□□□ -1.53
SMG1-207ENST00000563235 MTERF2Q49AM1 385 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 SLC41A1Q8IVJ1 513 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 JMYQ8N9B5 988 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 KLHL23Q8NBE8 558 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 MNS1Q8NEH6 495 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 THAP3Q8WTV1 239 aaPredicted RBP5.48□□□□□ -1.53
SMG1-207ENST00000563235 COG1Q8WTW3 980 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 ANKRD49Q8WVL7 239 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 DMRTB1Q96MA1 342 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 PPM1MQ96MI6 270 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 CRB3Q9BUF7 120 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 SAP130Q9H0E3 1048 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 TRHDEQ9UKU6 1024 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 BCORL1Q5H9F3 1711 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 M0R3H8 397 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 AHCYL1O43865 530 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 RFPL1O75677 317 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 MSL3P1P0C860 447 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 HSPA5P11021 654 aaKnown RBP5.48□□□□□ -1.53
SMG1-207ENST00000563235 XPAP23025 273 aaPredicted RBP5.48□□□□□ -1.53
SMG1-207ENST00000563235 GRK2P25098 689 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 EIF1AXP47813 144 aaKnown RBP5.48□□□□□ -1.53
SMG1-207ENST00000563235 MAN2A2P49641 1150 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 PERM1Q5SV97 790 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 C1orf53Q5VUE5 145 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 ISM2Q6H9L7 571 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 TDRD7Q8NHU6 1098 aaKnown RBP5.48□□□□□ -1.53
SMG1-207ENST00000563235 FAM81BQ96LP2 452 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 MOGAT1Q96PD6 335 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 TSGA13Q96PP4 275 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms