RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FBXO27Q8NI29 283 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 PIWIL2Q8TC59 973 aaKnown RBP5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 GPRASP2Q96D09 838 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 LIN37Q96GY3 246 aaPredicted RBP5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 CCDC120Q96HB5 630 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 KIRREL1Q96J84 757 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 SPATA32Q96LK8 384 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 UBP1Q9NZI7 540 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 ZSWIM5Q9P217 1185 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 CEP131Q9UPN4 1083 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 PRR36Q9H6K5 1346 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 ETV3P41162 512 aa5.22□□□□□ -1.57
SHCBP1-202ENST00000563219 APOBRQ0VD83 1088 aa5.22□□□□□ -1.57
SHCBP1-202ENST00000563219 COL9A2Q14055 689 aaPredicted RBP5.22□□□□□ -1.57
SHCBP1-202ENST00000563219 TMEM67Q5HYA8 995 aa5.22□□□□□ -1.57
SHCBP1-202ENST00000563219 ACSF2Q96CM8 615 aaPredicted RBP5.22□□□□□ -1.57
SHCBP1-202ENST00000563219 DPH2Q9BQC3 489 aaPredicted RBP5.22□□□□□ -1.57
SHCBP1-202ENST00000563219 INPP5FQ9Y2H2 1132 aa5.22□□□□□ -1.57
SHCBP1-202ENST00000563219 POLR3KQ9Y2Y1 108 aaPredicted RBP5.22□□□□□ -1.57
SHCBP1-202ENST00000563219 TNNI2P48788 182 aa5.21□□□□□ -1.58
SHCBP1-202ENST00000563219 GNL2Q13823 731 aaKnown RBP5.21□□□□□ -1.58
SHCBP1-202ENST00000563219 TMPRSS7Q7RTY8 843 aa5.21□□□□□ -1.58
SHCBP1-202ENST00000563219 REXO1Q8N1G1 1221 aaKnown RBP5.21□□□□□ -1.58
SHCBP1-202ENST00000563219 DNAJB8Q8NHS0 232 aa5.21□□□□□ -1.58
SHCBP1-202ENST00000563219 NKD1Q969G9 470 aa5.21□□□□□ -1.58
SHCBP1-202ENST00000563219 Q96M66 194 aa5.21□□□□□ -1.58
SHCBP1-202ENST00000563219 ALPK1Q96QP1 1244 aa5.21□□□□□ -1.58
SHCBP1-202ENST00000563219 CAPN10Q9HC96 672 aa5.21□□□□□ -1.58
SHCBP1-202ENST00000563219 TLR3O15455 904 aaKnown RBP5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 ATE1O95260 518 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 ESR1P03372 595 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 SOX9P48436 509 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 SEZ6Q53EL9 994 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 PRR23BQ6ZRT6 265 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 PPP1R13LQ8WUF5 828 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 SEC16BQ96JE7 1060 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 GMLQ99445 158 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 DUSP15Q9H1R2 295 aaPredicted RBP5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 EHMT1Q9H9B1 1298 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 CORINQ9Y5Q5 1042 aa5.2□□□□□ -1.58
SHCBP1-202ENST00000563219 DNAJC25-GNG10A0A024R161 153 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 UPK3BL1B0FP48 263 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 UPK3BL2E5RIL1 263 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 IGSF3O75054 1194 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 PLCG1P19174 1290 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 ZNF165P49910 485 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 NAALADL2Q58DX5 795 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 TMEM201Q5SNT2 666 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 MPZL3Q6UWV2 235 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 TTC6Q86TZ1 520 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 BRMS1Q9HCU9 246 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 GINM1Q9NU53 330 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 SLAMF8Q9P0V8 285 aa5.19□□□□□ -1.58
SHCBP1-202ENST00000563219 WASH4PA8MWX3 477 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 HTR3BO95264 441 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 SRFP11831 508 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 ATF4P18848 351 aaPredicted RBP5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 RAP1GAPP47736 663 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 YARSP54577 528 aaKnown RBP5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 CLCQ05315 142 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 GAB4Q2WGN9 574 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 RALGPS1Q5JS13 557 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 VPS37DQ86XT2 251 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 CILP2Q8IUL8 1156 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 FAM13CQ8NE31 585 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 CYB5D2Q8WUJ1 264 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 GPR62Q9BZJ7 368 aa5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 TRIT1Q9H3H1 467 aaKnown RBP5.18□□□□□ -1.58
SHCBP1-202ENST00000563219 TSPAN15O95858 294 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 IMPDH2P12268 514 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 RAC2P15153 192 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 TPP2P29144 1249 aaPredicted RBP5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 FBLN7Q53RD9 439 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 SYDE1Q6ZW31 735 aaPredicted RBP5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 CREG2Q8IUH2 290 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 SLFN12Q8IYM2 578 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 ABHD4Q8TB40 342 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 PPP1R16BQ96T49 567 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 ADAMTS10Q9H324 1103 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 GPATCH2Q9NW75 528 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 REV1Q9UBZ9 1251 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 TMEM59LQ9UK28 342 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 KCNH3Q9ULD8 1083 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 STRIP2Q9ULQ0 834 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 ZNRF3Q9ULT6 936 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 EFR3BQ9Y2G0 817 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 PCDHB14Q9Y5E9 798 aa5.17□□□□□ -1.58
SHCBP1-202ENST00000563219 MEIS3P2A8K0S8 358 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 GRIN3BO60391 1043 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 FGRP09769 529 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 MCM4P33991 863 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 NASPP49321 788 aaPredicted RBP5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 HK2P52789 917 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 ARID5AQ03989 594 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 SPOCD1Q6ZMY3 1216 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 GK5Q6ZS86 529 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 TSPYL5Q86VY4 417 aaPredicted RBP5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 DTWD2Q8NBA8 298 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms