RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ANTXR2P58335 489 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 KIF23Q02241 960 aaPredicted RBP22.1■■□□□ 1.13
RAB40C-207ENST00000563109 WTAPQ15007 396 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 SH3D19Q5HYK7 790 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 IFIT1BQ5T764 474 aaKnown RBP22.1■■□□□ 1.13
RAB40C-207ENST00000563109 SIAH1Q8IUQ4 282 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 ENAHQ8N8S7 591 aaPredicted RBP22.1■■□□□ 1.13
RAB40C-207ENST00000563109 PROCA1Q8NCQ7 364 aaPredicted RBP22.1■■□□□ 1.13
RAB40C-207ENST00000563109 MKL1Q969V6 931 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 TM6SF1Q9BZW5 370 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 VCPKMTQ9H867 229 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 KAT14Q9H8E8 782 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 MAP2K2P36507 400 aa22.09■■□□□ 1.13
RAB40C-207ENST00000563109 NOVP48745 357 aa22.09■■□□□ 1.13
RAB40C-207ENST00000563109 RBM25P49756 843 aaKnown RBP22.09■■□□□ 1.13
RAB40C-207ENST00000563109 FGD1P98174 961 aa22.09■■□□□ 1.13
RAB40C-207ENST00000563109 LPAR1Q92633 364 aa22.09■■□□□ 1.13
RAB40C-207ENST00000563109 MS4A4AQ96JQ5 239 aa22.09■■□□□ 1.13
RAB40C-207ENST00000563109 TMEM47Q9BQJ4 181 aa22.09■■□□□ 1.13
RAB40C-207ENST00000563109 CYP46A1Q9Y6A2 500 aa22.09■■□□□ 1.13
RAB40C-207ENST00000563109 RPS6KB1P23443 525 aa22.08■■□□□ 1.13
RAB40C-207ENST00000563109 RCSD1Q6JBY9 416 aa22.08■■□□□ 1.13
RAB40C-207ENST00000563109 GMCL1P1Q8NEA9 526 aa22.08■■□□□ 1.13
RAB40C-207ENST00000563109 ANKS1AQ92625 1134 aa22.08■■□□□ 1.13
RAB40C-207ENST00000563109 C12orf42Q96LP6 360 aa22.08■■□□□ 1.13
RAB40C-207ENST00000563109 TESPA1A2RU30 521 aaPredicted RBP22.07■■□□□ 1.12
RAB40C-207ENST00000563109 SH2B2O14492 632 aaPredicted RBP22.07■■□□□ 1.12
RAB40C-207ENST00000563109 PABPC4Q13310 644 aaKnown RBP eCLIP22.07■■□□□ 1.12
RAB40C-207ENST00000563109 SEC23AQ15436 765 aa22.07■■□□□ 1.12
RAB40C-207ENST00000563109 OTUD7BQ6GQQ9 843 aa22.07■■□□□ 1.12
RAB40C-207ENST00000563109 RUFY3Q7L099 469 aa22.07■■□□□ 1.12
RAB40C-207ENST00000563109 BRI3BPQ8WY22 251 aa22.07■■□□□ 1.12
RAB40C-207ENST00000563109 IL17RAQ96F46 866 aa22.07■■□□□ 1.12
RAB40C-207ENST00000563109 ZSWIM6Q9HCJ5 1215 aa22.07■■□□□ 1.12
RAB40C-207ENST00000563109 EMILIN3Q9NT22 766 aa22.07■■□□□ 1.12
RAB40C-207ENST00000563109 CPA1P15085 419 aa22.06■■□□□ 1.12
RAB40C-207ENST00000563109 EXOSC10Q01780 885 aaKnown RBP22.06■■□□□ 1.12
RAB40C-207ENST00000563109 DGKZQ13574 1117 aa22.06■■□□□ 1.12
RAB40C-207ENST00000563109 NFXL1Q6ZNB6 911 aa22.06■■□□□ 1.12
RAB40C-207ENST00000563109 TMTC2Q8N394 836 aa22.06■■□□□ 1.12
RAB40C-207ENST00000563109 TBC1D32Q96NH3 1257 aa22.06■■□□□ 1.12
RAB40C-207ENST00000563109 LRRC2Q9BYS8 371 aa22.06■■□□□ 1.12
RAB40C-207ENST00000563109 UPF3BQ9BZI7 483 aaKnown RBP22.06■■□□□ 1.12
RAB40C-207ENST00000563109 AGTPBP1Q9UPW5 1226 aa22.06■■□□□ 1.12
RAB40C-207ENST00000563109 CCDC69A6NI79 296 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 F5H6K3 240 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 WDR46O15213 610 aaKnown RBP22.05■■□□□ 1.12
RAB40C-207ENST00000563109 NDUFB10O96000 172 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 VCAM1P19320 739 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 KLRC3Q07444 240 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 COL9A3Q14050 684 aaPredicted RBP22.05■■□□□ 1.12
RAB40C-207ENST00000563109 SLFN13Q68D06 897 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 ANKRD23Q86SG2 305 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 SPICE1Q8N0Z3 855 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 PNMA1Q8ND90 353 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 IGDCC4Q8TDY8 1250 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 TCEANC2Q96MN5 208 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 ZIC5Q96T25 663 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 LY9Q9HBG7 655 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 ISY1Q9ULR0 285 aaKnown RBP22.05■■□□□ 1.12
RAB40C-207ENST00000563109 MTMR7Q9Y216 660 aa22.05■■□□□ 1.12
RAB40C-207ENST00000563109 LIFRP42702 1097 aa22.04■■□□□ 1.12
RAB40C-207ENST00000563109 TM4SF4P48230 202 aa22.04■■□□□ 1.12
RAB40C-207ENST00000563109 MOGSQ13724 837 aa22.04■■□□□ 1.12
RAB40C-207ENST00000563109 CATIPQ7Z7H3 387 aa22.04■■□□□ 1.12
RAB40C-207ENST00000563109 PNMA3Q9UL41 463 aa22.04■■□□□ 1.12
RAB40C-207ENST00000563109 BTBD19C9JJ37 291 aa22.03■■□□□ 1.12
RAB40C-207ENST00000563109 TREML2Q5T2D2 321 aa22.03■■□□□ 1.12
RAB40C-207ENST00000563109 Q6ZUG5 572 aa22.03■■□□□ 1.12
RAB40C-207ENST00000563109 IFNL1Q8IU54 200 aa22.03■■□□□ 1.12
RAB40C-207ENST00000563109 DCAF4Q8WV16 495 aa22.03■■□□□ 1.12
RAB40C-207ENST00000563109 TANGO6Q9C0B7 1094 aa22.03■■□□□ 1.12
RAB40C-207ENST00000563109 RPAP3Q9H6T3 665 aaPredicted RBP22.03■■□□□ 1.12
RAB40C-207ENST00000563109 ZCCHC17Q9NP64 241 aaKnown RBP22.03■■□□□ 1.12
RAB40C-207ENST00000563109 PDRG1Q9NUG6 133 aa22.03■■□□□ 1.12
RAB40C-207ENST00000563109 SLC45A1Q9Y2W3 748 aa22.03■■□□□ 1.12
RAB40C-207ENST00000563109 ALDH1A1P00352 501 aa22.02■■□□□ 1.12
RAB40C-207ENST00000563109 OSBPP22059 807 aa22.02■■□□□ 1.12
RAB40C-207ENST00000563109 SLC1A4P43007 532 aa22.02■■□□□ 1.12
RAB40C-207ENST00000563109 CCDC96Q2M329 555 aa22.02■■□□□ 1.12
RAB40C-207ENST00000563109 SYNE3Q6ZMZ3 975 aa22.02■■□□□ 1.12
RAB40C-207ENST00000563109 GMCL1Q96IK5 515 aa22.02■■□□□ 1.12
RAB40C-207ENST00000563109 USP17L15C9J2P7 530 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 USP17L13C9JLJ4 530 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 USP17L11C9JVI0 530 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 USP17L18D6R9N7 530 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 USP17L22D6RA61 530 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 USP17L17D6RBQ6 530 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 USP17L19D6RCP7 530 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 USP17L20D6RJB6 530 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 PDHXO00330 501 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 IGF2BP3O00425 579 aaKnown RBP eCLIP22.01■■□□□ 1.11
RAB40C-207ENST00000563109 BMP3P12645 472 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 IRX3P78415 501 aaPredicted RBP22.01■■□□□ 1.11
RAB40C-207ENST00000563109 USP17L24Q0WX57 530 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 KIAA1755Q5JYT7 1200 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 FAM83BQ5T0W9 1011 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 GPAT2Q6NUI2 795 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 FAM43AQ8N2R8 423 aa22.01■■□□□ 1.11
RAB40C-207ENST00000563109 DNAJC5GQ8N7S2 189 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms