RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 SLAMF8Q9P0V8 285 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 CEP131Q9UPN4 1083 aa7.52□□□□□ -1.21
SMG1-206ENST00000562668 CARMIL1Q5VZK9 1371 aa7.51□□□□□ -1.21
SMG1-206ENST00000562668 TAGLNQ01995 201 aaKnown RBP7.51□□□□□ -1.21
SMG1-206ENST00000562668 MESP2Q0VG99 397 aa7.51□□□□□ -1.21
SMG1-206ENST00000562668 PWP1Q13610 501 aa7.51□□□□□ -1.21
SMG1-206ENST00000562668 MLANAQ16655 118 aa7.51□□□□□ -1.21
SMG1-206ENST00000562668 CCDC27Q2M243 656 aa7.51□□□□□ -1.21
SMG1-206ENST00000562668 LIN37Q96GY3 246 aaPredicted RBP7.51□□□□□ -1.21
SMG1-206ENST00000562668 SLC38A3Q99624 504 aa7.51□□□□□ -1.21
SMG1-206ENST00000562668 SHROOM2Q13796 1616 aa7.51□□□□□ -1.21
SMG1-206ENST00000562668 EEA1Q15075 1411 aa7.51□□□□□ -1.21
SMG1-206ENST00000562668 ESR1P03372 595 aa7.5□□□□□ -1.21
SMG1-206ENST00000562668 GBP2P32456 591 aaPredicted RBP7.5□□□□□ -1.21
SMG1-206ENST00000562668 FAM84AQ96KN4 292 aa7.5□□□□□ -1.21
SMG1-206ENST00000562668 RSRP1Q9BUV0 290 aa7.5□□□□□ -1.21
SMG1-206ENST00000562668 TRIT1Q9H3H1 467 aaKnown RBP7.5□□□□□ -1.21
SMG1-206ENST00000562668 RAPGEF2Q9Y4G8 1499 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 UPK3BL1B0FP48 263 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 UPK3BL2E5RIL1 263 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 TMEM67Q5HYA8 995 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 SNAP47Q5SQN1 464 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 RELL1Q8IUW5 271 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 SLFN12Q8IYM2 578 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 DTWD2Q8NBA8 298 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 RNF141Q8WVD5 230 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 REV1Q9UBZ9 1251 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 TMEM59LQ9UK28 342 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 PRR36Q9H6K5 1346 aa7.49□□□□□ -1.21
SMG1-206ENST00000562668 DBX1A6NMT0 343 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 TPP2P29144 1249 aaPredicted RBP7.48□□□□□ -1.21
SMG1-206ENST00000562668 FAM160A1Q05DH4 1040 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 GAB4Q2WGN9 574 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 MPZL3Q6UWV2 235 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 CREG2Q8IUH2 290 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 BHLHE22Q8NFJ8 381 aaPredicted RBP7.48□□□□□ -1.21
SMG1-206ENST00000562668 GPR62Q9BZJ7 368 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 DUSP15Q9H1R2 295 aaPredicted RBP7.48□□□□□ -1.21
SMG1-206ENST00000562668 KLHL3Q9UH77 587 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 KCNH3Q9ULD8 1083 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 POLR3KQ9Y2Y1 108 aaPredicted RBP7.48□□□□□ -1.21
SMG1-206ENST00000562668 RIMBP3CA6NJZ7 1639 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 RIMBP3BA6NNM3 1639 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 KIF21BO75037 1637 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 RIMBP3Q9UFD9 1639 aa7.48□□□□□ -1.21
SMG1-206ENST00000562668 ERCC6L2Q5T890 1561 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 DNAJC25-GNG10A0A024R161 153 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 GRIN3BO60391 1043 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 HTR3BO95264 441 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 SRFP11831 508 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 RAC2P15153 192 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 MPP2Q14168 576 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 RALGPS1Q5JS13 557 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 TTC6Q86TZ1 520 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 GPATCH2Q9NW75 528 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 ARHGEF11O15085 1522 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 KIAA0586Q9BVV6 1533 aa7.47□□□□□ -1.21
SMG1-206ENST00000562668 WASH4PA8MWX3 477 aa7.46□□□□□ -1.22
SMG1-206ENST00000562668 PRR23BQ6ZRT6 265 aa7.46□□□□□ -1.22
SMG1-206ENST00000562668 REC114Q7Z4M0 266 aa7.46□□□□□ -1.22
SMG1-206ENST00000562668 GOLM1Q8NBJ4 401 aa7.46□□□□□ -1.22
SMG1-206ENST00000562668 DUSP13Q9UII6 198 aa7.46□□□□□ -1.22
SMG1-206ENST00000562668 CTTNBP2Q8WZ74 1663 aa7.46□□□□□ -1.22
SMG1-206ENST00000562668 GARTP22102 1010 aa7.45□□□□□ -1.22
SMG1-206ENST00000562668 TNNI2P48788 182 aa7.45□□□□□ -1.22
SMG1-206ENST00000562668 FAM196AQ6ZSG2 479 aa7.45□□□□□ -1.22
SMG1-206ENST00000562668 ERMP1Q7Z2K6 904 aa7.45□□□□□ -1.22
SMG1-206ENST00000562668 TSPYL5Q86VY4 417 aaPredicted RBP7.45□□□□□ -1.22
SMG1-206ENST00000562668 PPP1R16BQ96T49 567 aa7.45□□□□□ -1.22
SMG1-206ENST00000562668 ASPNQ9BXN1 380 aa7.45□□□□□ -1.22
SMG1-206ENST00000562668 GZF1Q9H116 711 aaPredicted RBP7.45□□□□□ -1.22
SMG1-206ENST00000562668 KBTBD4Q9NVX7 518 aa7.45□□□□□ -1.22
SMG1-206ENST00000562668 DNAJA2O60884 412 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 TSPAN15O95858 294 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 HPXP02790 462 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 HK2P52789 917 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 EGR3Q06889 387 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 FBXO27Q8NI29 283 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 ABHD4Q8TB40 342 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 CCDC74BQ96LY2 380 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 KREMEN1Q96MU8 473 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 IQGAP2Q13576 1575 aa7.44□□□□□ -1.22
SMG1-206ENST00000562668 MINDY4BA8MYZ0 360 aa7.43□□□□□ -1.22
SMG1-206ENST00000562668 CHURC1-FNTBB4DL54 471 aa7.43□□□□□ -1.22
SMG1-206ENST00000562668 LTKP29376 864 aa7.43□□□□□ -1.22
SMG1-206ENST00000562668 ERVFC1P60507 584 aa7.43□□□□□ -1.22
SMG1-206ENST00000562668 PHACTR4Q8IZ21 702 aa7.43□□□□□ -1.22
SMG1-206ENST00000562668 BAHD1Q8TBE0 780 aaPredicted RBP7.43□□□□□ -1.22
SMG1-206ENST00000562668 LRRC3Q9BY71 257 aa7.43□□□□□ -1.22
SMG1-206ENST00000562668 KCNQ5Q9NR82 932 aa7.43□□□□□ -1.22
SMG1-206ENST00000562668 ARAP1Q96P48 1450 aa7.43□□□□□ -1.22
SMG1-206ENST00000562668 UGGT2Q9NYU1 1516 aa7.42□□□□□ -1.22
SMG1-206ENST00000562668 TLR3O15455 904 aaKnown RBP7.42□□□□□ -1.22
SMG1-206ENST00000562668 LRRN2O75325 713 aa7.42□□□□□ -1.22
SMG1-206ENST00000562668 FAM9AQ8IZU1 332 aaPredicted RBP7.42□□□□□ -1.22
SMG1-206ENST00000562668 MYLIPQ8WY64 445 aa7.42□□□□□ -1.22
SMG1-206ENST00000562668 ADAMTS10Q9H324 1103 aa7.42□□□□□ -1.22
SMG1-206ENST00000562668 NSUN3Q9H649 340 aaKnown RBP7.42□□□□□ -1.22
SMG1-206ENST00000562668 COPRSQ9NQ92 184 aa7.42□□□□□ -1.22
SMG1-206ENST00000562668 PCDHA11Q9Y5I1 949 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms