RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 TCHHQ07283 1943 aa16.56■□□□□ 0.24
COMMD4-205ENST00000562310 SCN4AP35499 1836 aa16.55■□□□□ 0.24
COMMD4-205ENST00000562310 PALM3A6NDB9 673 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-205ENST00000562310 SMARCA1P28370 1054 aa16.55■□□□□ 0.24
COMMD4-205ENST00000562310 ICA1Q05084 483 aa16.55■□□□□ 0.24
COMMD4-205ENST00000562310 MCTP1Q6DN14 999 aa16.55■□□□□ 0.24
COMMD4-205ENST00000562310 DPY19L2Q6NUT2 758 aa16.55■□□□□ 0.24
COMMD4-205ENST00000562310 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-205ENST00000562310 TRPM4Q8TD43 1214 aa16.55■□□□□ 0.24
COMMD4-205ENST00000562310 ADARB2Q9NS39 739 aaKnown RBP16.55■□□□□ 0.24
COMMD4-205ENST00000562310 GINM1Q9NU53 330 aa16.55■□□□□ 0.24
COMMD4-205ENST00000562310 MAD2L2Q9UI95 211 aa16.55■□□□□ 0.24
COMMD4-205ENST00000562310 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
COMMD4-205ENST00000562310 DCAF15Q66K64 600 aa16.54■□□□□ 0.24
COMMD4-205ENST00000562310 ATL3Q6DD88 541 aa16.54■□□□□ 0.24
COMMD4-205ENST00000562310 BRAPQ7Z569 592 aa16.54■□□□□ 0.24
COMMD4-205ENST00000562310 ZNF784Q8NCA9 323 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-205ENST00000562310 MKL1Q969V6 931 aa16.54■□□□□ 0.24
COMMD4-205ENST00000562310 L3MBTL3Q96JM7 780 aaPredicted RBP16.54■□□□□ 0.24
COMMD4-205ENST00000562310 TEPSINQ96N21 525 aa16.54■□□□□ 0.24
COMMD4-205ENST00000562310 SPZ1Q9BXG8 430 aa16.54■□□□□ 0.24
COMMD4-205ENST00000562310 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
COMMD4-205ENST00000562310 DOCK1Q14185 1865 aa16.54■□□□□ 0.24
COMMD4-205ENST00000562310 PPFIA3O75145 1194 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 DDNO94850 711 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-205ENST00000562310 GDF11O95390 407 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 GH2P01242 217 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 PDHBP11177 359 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 FOSBP53539 338 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 KRT85P78386 507 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 SAFBQ15424 915 aaKnown RBP eCLIP16.53■□□□□ 0.24
COMMD4-205ENST00000562310 GPATCH4Q5T3I0 446 aaKnown RBP16.53■□□□□ 0.24
COMMD4-205ENST00000562310 ANGEL2Q5VTE6 544 aaKnown RBP16.53■□□□□ 0.24
COMMD4-205ENST00000562310 KRT40Q6A162 431 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 FERMT3Q86UX7 667 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 LRRC47Q8N1G4 583 aaKnown RBP16.53■□□□□ 0.24
COMMD4-205ENST00000562310 SRBD1Q8N5C6 995 aaKnown RBP16.53■□□□□ 0.24
COMMD4-205ENST00000562310 TMEM87AQ8NBN3 555 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 DEFB129Q9H1M3 183 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 ZBTB21Q9ULJ3 1066 aa16.53■□□□□ 0.24
COMMD4-205ENST00000562310 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.24
COMMD4-205ENST00000562310 EPS15P42566 896 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 ATP2B2Q01814 1243 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 SEPT2Q15019 361 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 SKOR2Q2VWA4 1001 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-205ENST00000562310 CLEC10AQ8IUN9 316 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 DCAF4Q8WV16 495 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 ANP32EQ9BTT0 268 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 ARHGEF10LQ9HCE6 1279 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 GGA3Q9NZ52 723 aa16.52■□□□□ 0.24
COMMD4-205ENST00000562310 ASTN2O75129 1339 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-205ENST00000562310 KLRF2D3W0D1 207 aa16.51■□□□□ 0.23
COMMD4-205ENST00000562310 ASNSP08243 561 aa16.51■□□□□ 0.23
COMMD4-205ENST00000562310 SLURP2P0DP57 97 aa16.51■□□□□ 0.23
COMMD4-205ENST00000562310 SCG2P13521 617 aa16.51■□□□□ 0.23
COMMD4-205ENST00000562310 GUCY1A2P33402 732 aa16.51■□□□□ 0.23
COMMD4-205ENST00000562310 CAP2P40123 477 aa16.51■□□□□ 0.23
COMMD4-205ENST00000562310 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
COMMD4-205ENST00000562310 PFKFB3Q16875 520 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-205ENST00000562310 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
COMMD4-205ENST00000562310 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
COMMD4-205ENST00000562310 ZNF396Q96N95 335 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-205ENST00000562310 AIFM3Q96NN9 605 aa16.51■□□□□ 0.23
COMMD4-205ENST00000562310 V9GY48 417 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-205ENST00000562310 WDR90Q96KV7 1748 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 USP17L5A8MUK1 530 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 MMP1P03956 469 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
COMMD4-205ENST00000562310 KIF23Q02241 960 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-205ENST00000562310 DNM1Q05193 864 aaKnown RBP16.5■□□□□ 0.23
COMMD4-205ENST00000562310 ZNF543Q08ER8 600 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 GNL2Q13823 731 aaKnown RBP16.5■□□□□ 0.23
COMMD4-205ENST00000562310 PKN1Q16512 942 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 STAG2Q8N3U4 1231 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 ZNF341Q9BYN7 854 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 SCAND2PQ9GZW5 306 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-205ENST00000562310 BRMS1Q9HCU9 246 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 SH3GLB2Q9NR46 395 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 CFAP45Q9UL16 551 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 MTMR7Q9Y216 660 aa16.5■□□□□ 0.23
COMMD4-205ENST00000562310 hCG_1984214I3L0E3 225 aa16.49■□□□□ 0.23
COMMD4-205ENST00000562310 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
COMMD4-205ENST00000562310 CCDC96Q2M329 555 aa16.49■□□□□ 0.23
COMMD4-205ENST00000562310 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
COMMD4-205ENST00000562310 USP50Q70EL3 339 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-205ENST00000562310 ZNF713Q8N859 430 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-205ENST00000562310 CCDC148Q8NFR7 591 aa16.49■□□□□ 0.23
COMMD4-205ENST00000562310 RRP36Q96EU6 259 aaKnown RBP16.49■□□□□ 0.23
COMMD4-205ENST00000562310 GMCL1Q96IK5 515 aa16.49■□□□□ 0.23
COMMD4-205ENST00000562310 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
COMMD4-205ENST00000562310 CNPY2Q9Y2B0 182 aa16.49■□□□□ 0.23
COMMD4-205ENST00000562310 ELP1O95163 1332 aa16.48■□□□□ 0.23
COMMD4-205ENST00000562310 GLTPD2A6NH11 291 aa16.48■□□□□ 0.23
COMMD4-205ENST00000562310 PHF20L1A8MW92 1017 aa16.48■□□□□ 0.23
COMMD4-205ENST00000562310 U2AF2P26368 475 aaKnown RBP eCLIP16.48■□□□□ 0.23
COMMD4-205ENST00000562310 CALML3P27482 149 aa16.48■□□□□ 0.23
COMMD4-205ENST00000562310 HIRAP54198 1017 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms