RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 KIAA0586Q9BVV6 1533 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 SYNGAP1Q96PV0 1343 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 CARMIL1Q5VZK9 1371 aa5.93□□□□□ -1.46
LRRC28-222ENST00000561431 PRG4Q92954 1404 aaPredicted RBP5.92□□□□□ -1.46
LRRC28-222ENST00000561431 FAM170BA6NMN3 283 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 PPP2R5EQ16537 467 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 LRRFIP1Q32MZ4 808 aaKnown RBP5.92□□□□□ -1.46
LRRC28-222ENST00000561431 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.92□□□□□ -1.46
LRRC28-222ENST00000561431 CKAP2LQ8IYA6 745 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 KCT2Q8NC54 265 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 RNF214Q8ND24 703 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 PMFBP1Q8TBY8 1022 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 TBC1D32Q96NH3 1257 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 HIRIP3Q9BW71 556 aaPredicted RBP5.92□□□□□ -1.46
LRRC28-222ENST00000561431 WNT10AQ9GZT5 417 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 LGR6Q9HBX8 967 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 DISC1Q9NRI5 854 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 ZC3H7BQ9UGR2 993 aaKnown RBP5.92□□□□□ -1.46
LRRC28-222ENST00000561431 DAGLAQ9Y4D2 1042 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 ACTL7BQ9Y614 415 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 TACC3Q9Y6A5 838 aa5.92□□□□□ -1.46
LRRC28-222ENST00000561431 FGRP09769 529 aa5.91□□□□□ -1.46
LRRC28-222ENST00000561431 YARSP54577 528 aaKnown RBP5.91□□□□□ -1.46
LRRC28-222ENST00000561431 ZBTB37Q5TC79 503 aa5.91□□□□□ -1.46
LRRC28-222ENST00000561431 HID1Q8IV36 788 aa5.91□□□□□ -1.46
LRRC28-222ENST00000561431 SMYD4Q8IYR2 804 aaPredicted RBP5.91□□□□□ -1.46
LRRC28-222ENST00000561431 C2CD4AQ8NCU7 369 aaPredicted RBP5.91□□□□□ -1.46
LRRC28-222ENST00000561431 TRIM55Q9BYV6 548 aa5.91□□□□□ -1.46
LRRC28-222ENST00000561431 EHMT1Q9H9B1 1298 aa5.91□□□□□ -1.46
LRRC28-222ENST00000561431 FAM105AQ9NUU6 356 aa5.91□□□□□ -1.46
LRRC28-222ENST00000561431 PCDHGC5Q9Y5F6 944 aa5.91□□□□□ -1.46
LRRC28-222ENST00000561431 IQGAP2Q13576 1575 aa5.91□□□□□ -1.46
LRRC28-222ENST00000561431 RAPGEF2Q9Y4G8 1499 aa5.9□□□□□ -1.46
LRRC28-222ENST00000561431 U2SURPO15042 1029 aaKnown RBP5.9□□□□□ -1.46
LRRC28-222ENST00000561431 FARP2O94887 1054 aaPredicted RBP5.9□□□□□ -1.46
LRRC28-222ENST00000561431 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.46
LRRC28-222ENST00000561431 WFDC3Q8IUB2 231 aa5.9□□□□□ -1.46
LRRC28-222ENST00000561431 FAM13CQ8NE31 585 aa5.9□□□□□ -1.46
LRRC28-222ENST00000561431 EZH1Q92800 747 aaPredicted RBP5.9□□□□□ -1.46
LRRC28-222ENST00000561431 CHMP4AQ9BY43 222 aa5.9□□□□□ -1.46
LRRC28-222ENST00000561431 ZNF408Q9H9D4 720 aa5.9□□□□□ -1.46
LRRC28-222ENST00000561431 ADAM30Q9UKF2 790 aa5.9□□□□□ -1.46
LRRC28-222ENST00000561431 PCOLCE2Q9UKZ9 415 aa5.9□□□□□ -1.46
LRRC28-222ENST00000561431 ZNRF3Q9ULT6 936 aa5.9□□□□□ -1.46
LRRC28-222ENST00000561431 PRXQ9BXM0 1461 aa5.9□□□□□ -1.47
LRRC28-222ENST00000561431 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.89□□□□□ -1.47
LRRC28-222ENST00000561431 ATE1O95260 518 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 NFICP08651 508 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 RAG1P15918 1043 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 ETFBP38117 255 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 MAP7Q14244 749 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 ZNF792Q3KQV3 632 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 TNNI3KQ59H18 835 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 ARSHQ5FYA8 562 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 SOGA3Q5TF21 947 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 ZNF574Q6ZN55 896 aaPredicted RBP5.89□□□□□ -1.47
LRRC28-222ENST00000561431 PHACTR4Q8IZ21 702 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 OR6P1Q8NGX9 317 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 XAGE3Q8WTP9 111 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 ISL2Q96A47 359 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 ARMC5Q96C12 935 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 ANTXR1Q9H6X2 564 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 LRRC4CQ9HCJ2 640 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 GMIPQ9P107 970 aa5.89□□□□□ -1.47
LRRC28-222ENST00000561431 ADCY10Q96PN6 1610 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 CTTNBP2Q8WZ74 1663 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 FAM86C2PA6NEL3 165 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 BIN1O00499 593 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 SMAD7O15105 426 aaKnown RBP5.88□□□□□ -1.47
LRRC28-222ENST00000561431 PKN1Q16512 942 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 ANKS3Q6ZW76 656 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 BCL7CQ8WUZ0 217 aaPredicted RBP5.88□□□□□ -1.47
LRRC28-222ENST00000561431 TMEM40Q8WWA1 233 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 TMEM87BQ96K49 555 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 DPH2Q9BQC3 489 aaPredicted RBP5.88□□□□□ -1.47
LRRC28-222ENST00000561431 DISP1Q96F81 1524 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 UGGT2Q9NYU1 1516 aa5.88□□□□□ -1.47
LRRC28-222ENST00000561431 SLC22A31A6NKX4 558 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 UPK3BL1B0FP48 263 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 CHURC1-FNTBB4DL54 471 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 UPK3BL2E5RIL1 263 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 NEFMP07197 916 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 GBP1P32455 592 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 GIPRP48546 466 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 RING1Q06587 406 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 PLCL1Q15111 1095 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 LARP1BQ659C4 914 aaKnown RBP5.87□□□□□ -1.47
LRRC28-222ENST00000561431 SLC6A19Q695T7 634 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 OVOS1Q6IE37 1185 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 ZNF765Q7L2R6 523 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 NLRC3Q7RTR2 1065 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 SPRED2Q7Z698 418 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 MCATQ8IVS2 390 aaKnown RBP5.87□□□□□ -1.47
LRRC28-222ENST00000561431 ACSF2Q96CM8 615 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-222ENST00000561431 SHDQ96IW2 340 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 KRTAP17-1Q9BYP8 105 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 FBRSQ9HAH7 460 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 TJP2Q9UDY2 1190 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 PRKAG3Q9UGI9 489 aa5.87□□□□□ -1.47
LRRC28-222ENST00000561431 PRR36Q9H6K5 1346 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms