RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 NID2Q14112 1375 aa8.81□□□□□ -1
TPM1-231ENST00000561395 FLT1P17948 1338 aa8.8□□□□□ -1
TPM1-231ENST00000561395 MYO3BQ8WXR4 1341 aa8.8□□□□□ -1
TPM1-231ENST00000561395 F8W031 263 aaPredicted RBP8.8□□□□□ -1
TPM1-231ENST00000561395 ORC4O43929 436 aa8.8□□□□□ -1
TPM1-231ENST00000561395 PPP1R12BO60237 982 aaPredicted RBP8.8□□□□□ -1
TPM1-231ENST00000561395 SLC3A2P08195 630 aaKnown RBP8.8□□□□□ -1
TPM1-231ENST00000561395 SYT1P21579 422 aa8.8□□□□□ -1
TPM1-231ENST00000561395 LIFRP42702 1097 aa8.8□□□□□ -1
TPM1-231ENST00000561395 EVX2Q03828 476 aa8.8□□□□□ -1
TPM1-231ENST00000561395 TMEM67Q5HYA8 995 aa8.8□□□□□ -1
TPM1-231ENST00000561395 RRP12Q5JTH9 1297 aaKnown RBP8.8□□□□□ -1
TPM1-231ENST00000561395 SGMS1Q86VZ5 419 aa8.8□□□□□ -1
TPM1-231ENST00000561395 NSUN7Q8NE18 718 aaKnown RBP8.8□□□□□ -1
TPM1-231ENST00000561395 SMARCC2Q8TAQ2 1214 aa8.8□□□□□ -1
TPM1-231ENST00000561395 IGDCC4Q8TDY8 1250 aa8.8□□□□□ -1
TPM1-231ENST00000561395 TGFBRAP1Q8WUH2 860 aa8.8□□□□□ -1
TPM1-231ENST00000561395 ESR2Q92731 530 aa8.8□□□□□ -1
TPM1-231ENST00000561395 CHMP4CQ96CF2 233 aa8.8□□□□□ -1
TPM1-231ENST00000561395 PTPN18Q99952 460 aa8.8□□□□□ -1
TPM1-231ENST00000561395 HTATIP2Q9BUP3 242 aa8.8□□□□□ -1
TPM1-231ENST00000561395 COL25A1Q9BXS0 654 aaPredicted RBP8.8□□□□□ -1
TPM1-231ENST00000561395 ZSWIM5Q9P217 1185 aa8.8□□□□□ -1
TPM1-231ENST00000561395 MYH8P13535 1937 aa8.8□□□□□ -1
TPM1-231ENST00000561395 TESPA1A2RU30 521 aaPredicted RBP8.79□□□□□ -1
TPM1-231ENST00000561395 DDX11L8A8MPP1 907 aa8.79□□□□□ -1
TPM1-231ENST00000561395 IFIT3O14879 490 aaKnown RBP8.79□□□□□ -1
TPM1-231ENST00000561395 STX6O43752 255 aa8.79□□□□□ -1
TPM1-231ENST00000561395 JAK2O60674 1132 aa8.79□□□□□ -1
TPM1-231ENST00000561395 BAG4O95429 457 aaKnown RBP8.79□□□□□ -1
TPM1-231ENST00000561395 CTDNEP1O95476 244 aa8.79□□□□□ -1
TPM1-231ENST00000561395 ZSCAN22P10073 491 aaPredicted RBP8.79□□□□□ -1
TPM1-231ENST00000561395 PDIA4P13667 645 aaKnown RBP8.79□□□□□ -1
TPM1-231ENST00000561395 PDCP20941 246 aa8.79□□□□□ -1
TPM1-231ENST00000561395 NT5C2P49902 561 aa8.79□□□□□ -1
TPM1-231ENST00000561395 CCT2P78371 535 aaKnown RBP8.79□□□□□ -1
TPM1-231ENST00000561395 HDLBPQ00341 1268 aaKnown RBP8.79□□□□□ -1
TPM1-231ENST00000561395 SART3Q15020 963 aaKnown RBP8.79□□□□□ -1
TPM1-231ENST00000561395 TAF1CQ15572 869 aaPredicted RBP8.79□□□□□ -1
TPM1-231ENST00000561395 C12orf60Q5U649 245 aa8.79□□□□□ -1
TPM1-231ENST00000561395 APOA5Q6Q788 366 aa8.79□□□□□ -1
TPM1-231ENST00000561395 HHIPL2Q6UWX4 724 aa8.79□□□□□ -1
TPM1-231ENST00000561395 MAPKAPK5Q8IW41 473 aa8.79□□□□□ -1
TPM1-231ENST00000561395 AMOTL1Q8IY63 956 aa8.79□□□□□ -1
TPM1-231ENST00000561395 STK11IPQ8N1F8 1099 aa8.79□□□□□ -1
TPM1-231ENST00000561395 TEKT1Q969V4 418 aa8.79□□□□□ -1
TPM1-231ENST00000561395 MRIQ9BWK5 157 aa8.79□□□□□ -1
TPM1-231ENST00000561395 DEFB129Q9H1M3 183 aa8.79□□□□□ -1
TPM1-231ENST00000561395 NCOA5Q9HCD5 579 aaKnown RBP8.79□□□□□ -1
TPM1-231ENST00000561395 TOMM22Q9NS69 142 aa8.79□□□□□ -1
TPM1-231ENST00000561395 NAP1L2Q9ULW6 460 aaPredicted RBP8.79□□□□□ -1
TPM1-231ENST00000561395 NR2E3Q9Y5X4 410 aa8.79□□□□□ -1
TPM1-231ENST00000561395 MYH15Q9Y2K3 1946 aa8.79□□□□□ -1
TPM1-231ENST00000561395 SIPA1L1O43166 1804 aa8.78□□□□□ -1
TPM1-231ENST00000561395 PTPDC1A2A3K4 754 aa8.78□□□□□ -1
TPM1-231ENST00000561395 UNCXA6NJT0 531 aa8.78□□□□□ -1
TPM1-231ENST00000561395 DTNBO60941 627 aa8.78□□□□□ -1
TPM1-231ENST00000561395 PRDM1O75626 825 aa8.78□□□□□ -1
TPM1-231ENST00000561395 PYGBP11216 843 aa8.78□□□□□ -1
TPM1-231ENST00000561395 CRKP46108 304 aa8.78□□□□□ -1
TPM1-231ENST00000561395 HMGN5P82970 282 aaKnown RBP8.78□□□□□ -1
TPM1-231ENST00000561395 PDE4BQ07343 736 aa8.78□□□□□ -1
TPM1-231ENST00000561395 WTAPQ15007 396 aa8.78□□□□□ -1
TPM1-231ENST00000561395 MTFR1Q15390 333 aa8.78□□□□□ -1
TPM1-231ENST00000561395 FOXD4L5Q5VV16 416 aaPredicted RBP8.78□□□□□ -1
TPM1-231ENST00000561395 APOBEC3HQ6NTF7 200 aaKnown RBP8.78□□□□□ -1
TPM1-231ENST00000561395 UBE2Q1Q7Z7E8 422 aa8.78□□□□□ -1
TPM1-231ENST00000561395 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
TPM1-231ENST00000561395 FOXD4L4Q8WXT5 416 aaPredicted RBP8.78□□□□□ -1
TPM1-231ENST00000561395 ZBED3Q96IU2 234 aaPredicted RBP8.78□□□□□ -1
TPM1-231ENST00000561395 ZDHHC15Q96MV8 337 aa8.78□□□□□ -1
TPM1-231ENST00000561395 UBAC1Q9BSL1 405 aa8.78□□□□□ -1
TPM1-231ENST00000561395 ARHGAP39Q9C0H5 1083 aa8.78□□□□□ -1
TPM1-231ENST00000561395 SENP2Q9HC62 589 aa8.78□□□□□ -1
TPM1-231ENST00000561395 ZFYVE28Q9HCC9 887 aa8.78□□□□□ -1
TPM1-231ENST00000561395 SAP30BPQ9UHR5 308 aaKnown RBP8.78□□□□□ -1
TPM1-231ENST00000561395 SERPINA10Q9UK55 444 aa8.78□□□□□ -1
TPM1-231ENST00000561395 MTMR6Q9Y217 621 aa8.78□□□□□ -1
TPM1-231ENST00000561395 PPP2R3BQ9Y5P8 575 aa8.78□□□□□ -1
TPM1-231ENST00000561395 DOCK3Q8IZD9 2030 aa8.78□□□□□ -1
TPM1-231ENST00000561395 TNKSO95271 1327 aa8.78□□□□□ -1
TPM1-231ENST00000561395 ERICH2A1L162 156 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 CCDC69A6NI79 296 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 ZBTB43O43298 467 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 DHX16O60231 1041 aaKnown RBP8.77□□□□□ -1.01
TPM1-231ENST00000561395 RANBP6O60518 1105 aaKnown RBP8.77□□□□□ -1.01
TPM1-231ENST00000561395 POLR3DP05423 398 aaPredicted RBP8.77□□□□□ -1.01
TPM1-231ENST00000561395 PTMSP20962 102 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 IREB2P48200 963 aaKnown RBP8.77□□□□□ -1.01
TPM1-231ENST00000561395 METAP2P50579 478 aaKnown RBP eCLIP8.77□□□□□ -1.01
TPM1-231ENST00000561395 RCAN1P53805 252 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 SEC23AQ15436 765 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 LARP1BQ659C4 914 aaKnown RBP8.77□□□□□ -1.01
TPM1-231ENST00000561395 NFXL1Q6ZNB6 911 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 MICU3Q86XE3 530 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 RAB11FIP4Q86YS3 637 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 KIAA0825Q8IV33 1275 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 ANKRD13AQ8IZ07 590 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 TMTC2Q8N394 836 aa8.77□□□□□ -1.01
TPM1-231ENST00000561395 DEFB123Q8N688 67 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms