RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 PCDHA11Q9Y5I1 949 aa6.93□□□□□ -1.3
USP8-216ENST00000561206 TACC3Q9Y6A5 838 aa6.93□□□□□ -1.3
USP8-216ENST00000561206 CARNS1A5YM72 827 aa6.92□□□□□ -1.3
USP8-216ENST00000561206 PTPN11Q06124 597 aaPredicted RBP6.92□□□□□ -1.3
USP8-216ENST00000561206 RTP5Q14D33 572 aa6.92□□□□□ -1.3
USP8-216ENST00000561206 VMACQ2NL98 169 aa6.92□□□□□ -1.3
USP8-216ENST00000561206 CNKSR3Q6P9H4 555 aa6.92□□□□□ -1.3
USP8-216ENST00000561206 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
USP8-216ENST00000561206 MRPL41Q8IXM3 137 aaKnown RBP6.92□□□□□ -1.3
USP8-216ENST00000561206 TP53I13Q8NBR0 393 aaPredicted RBP6.92□□□□□ -1.3
USP8-216ENST00000561206 DMRTB1Q96MA1 342 aa6.92□□□□□ -1.3
USP8-216ENST00000561206 H3BRB1 525 aa6.91□□□□□ -1.3
USP8-216ENST00000561206 PRICKLE3O43900 615 aaPredicted RBP6.91□□□□□ -1.3
USP8-216ENST00000561206 TPTE2Q6XPS3 522 aa6.91□□□□□ -1.3
USP8-216ENST00000561206 GLYCTKQ8IVS8 523 aa6.91□□□□□ -1.3
USP8-216ENST00000561206 G6PC3Q9BUM1 346 aa6.91□□□□□ -1.3
USP8-216ENST00000561206 TUT1Q9H6E5 874 aaKnown RBP6.91□□□□□ -1.3
USP8-216ENST00000561206 CRTAC1Q9NQ79 661 aa6.91□□□□□ -1.3
USP8-216ENST00000561206 EFEMP2O95967 443 aa6.9□□□□□ -1.3
USP8-216ENST00000561206 VIPR1P32241 457 aa6.9□□□□□ -1.3
USP8-216ENST00000561206 TEKQ02763 1124 aa6.9□□□□□ -1.3
USP8-216ENST00000561206 ADGRF1Q5T601 910 aa6.9□□□□□ -1.3
USP8-216ENST00000561206 DTWD2Q8NBA8 298 aa6.9□□□□□ -1.3
USP8-216ENST00000561206 XAGE3Q8WTP9 111 aa6.9□□□□□ -1.3
USP8-216ENST00000561206 GAL3ST3Q96A11 431 aa6.9□□□□□ -1.3
USP8-216ENST00000561206 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
USP8-216ENST00000561206 PALD1Q9ULE6 856 aa6.9□□□□□ -1.3
USP8-216ENST00000561206 LTKP29376 864 aa6.89□□□□□ -1.31
USP8-216ENST00000561206 MZB1Q8WU39 189 aa6.89□□□□□ -1.31
USP8-216ENST00000561206 SORCS2Q96PQ0 1159 aa6.89□□□□□ -1.31
USP8-216ENST00000561206 USTQ9Y2C2 406 aa6.89□□□□□ -1.31
USP8-216ENST00000561206 K7ESM1 405 aa6.88□□□□□ -1.31
USP8-216ENST00000561206 MATN3O15232 486 aa6.88□□□□□ -1.31
USP8-216ENST00000561206 GSTT1P30711 240 aa6.88□□□□□ -1.31
USP8-216ENST00000561206 GRK4P32298 578 aa6.88□□□□□ -1.31
USP8-216ENST00000561206 GALK1P51570 392 aa6.88□□□□□ -1.31
USP8-216ENST00000561206 CDR1P51861 262 aa6.88□□□□□ -1.31
USP8-216ENST00000561206 PLCB3Q01970 1234 aa6.88□□□□□ -1.31
USP8-216ENST00000561206 WIPI1Q5MNZ9 446 aaPredicted RBP6.88□□□□□ -1.31
USP8-216ENST00000561206 SRRDQ9UH36 339 aa6.88□□□□□ -1.31
USP8-216ENST00000561206 GTF3C3Q9Y5Q9 886 aa6.88□□□□□ -1.31
USP8-216ENST00000561206 MAGEA10P43363 369 aaPredicted RBP6.87□□□□□ -1.31
USP8-216ENST00000561206 ZNF827Q17R98 1081 aa6.87□□□□□ -1.31
USP8-216ENST00000561206 PCNX4Q63HM2 1172 aa6.87□□□□□ -1.31
USP8-216ENST00000561206 B4GALNT3Q6L9W6 998 aa6.87□□□□□ -1.31
USP8-216ENST00000561206 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.87□□□□□ -1.31
USP8-216ENST00000561206 SLC16A11Q8NCK7 471 aa6.87□□□□□ -1.31
USP8-216ENST00000561206 RBCK1Q9BYM8 510 aa6.87□□□□□ -1.31
USP8-216ENST00000561206 SRCIN1Q9C0H9 1055 aa6.87□□□□□ -1.31
USP8-216ENST00000561206 TJP2Q9UDY2 1190 aa6.87□□□□□ -1.31
USP8-216ENST00000561206 CEP131Q9UPN4 1083 aa6.87□□□□□ -1.31
USP8-216ENST00000561206 C1QTNF3-AMACRE9PGA6 284 aa6.86□□□□□ -1.31
USP8-216ENST00000561206 ABLIM1O14639 778 aa6.86□□□□□ -1.31
USP8-216ENST00000561206 SERPINB4P48594 390 aa6.86□□□□□ -1.31
USP8-216ENST00000561206 OLFML2BQ68BL8 750 aa6.86□□□□□ -1.31
USP8-216ENST00000561206 SLC6A19Q695T7 634 aa6.86□□□□□ -1.31
USP8-216ENST00000561206 IGDCC3Q8IVU1 814 aa6.86□□□□□ -1.31
USP8-216ENST00000561206 VWCEQ96DN2 955 aa6.86□□□□□ -1.31
USP8-216ENST00000561206 KCNH3Q9ULD8 1083 aa6.86□□□□□ -1.31
USP8-216ENST00000561206 RBM47A0AV96 593 aaKnown RBP6.85□□□□□ -1.31
USP8-216ENST00000561206 GFRA2O00451 464 aa6.85□□□□□ -1.31
USP8-216ENST00000561206 NRDCO43847 1150 aa6.85□□□□□ -1.31
USP8-216ENST00000561206 ADAM17P78536 824 aa6.85□□□□□ -1.31
USP8-216ENST00000561206 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.85□□□□□ -1.31
USP8-216ENST00000561206 CDK8P49336 464 aa6.84□□□□□ -1.31
USP8-216ENST00000561206 ERVFRD-1P60508 538 aa6.84□□□□□ -1.31
USP8-216ENST00000561206 TMEM87BQ96K49 555 aa6.84□□□□□ -1.31
USP8-216ENST00000561206 PWWP2AQ96N64 755 aa6.84□□□□□ -1.31
USP8-216ENST00000561206 FFAR3O14843 346 aa6.83□□□□□ -1.32
USP8-216ENST00000561206 PNLIPP16233 465 aa6.83□□□□□ -1.32
USP8-216ENST00000561206 KIR2DL1P43626 348 aaPredicted RBP6.83□□□□□ -1.32
USP8-216ENST00000561206 KIR2DL2P43627 348 aaPredicted RBP6.83□□□□□ -1.32
USP8-216ENST00000561206 KCNC1P48547 511 aa6.83□□□□□ -1.32
USP8-216ENST00000561206 FBXO24O75426 580 aa6.82□□□□□ -1.32
USP8-216ENST00000561206 CELA3AP09093 270 aa6.82□□□□□ -1.32
USP8-216ENST00000561206 SLURP1P55000 103 aa6.82□□□□□ -1.32
USP8-216ENST00000561206 LDHDQ86WU2 507 aa6.82□□□□□ -1.32
USP8-216ENST00000561206 MCATQ8IVS2 390 aaKnown RBP6.82□□□□□ -1.32
USP8-216ENST00000561206 TMC1Q8TDI8 760 aa6.82□□□□□ -1.32
USP8-216ENST00000561206 DPH2Q9BQC3 489 aaPredicted RBP6.82□□□□□ -1.32
USP8-216ENST00000561206 PCDHA5Q9Y5H7 936 aa6.82□□□□□ -1.32
USP8-216ENST00000561206 GRIN3BO60391 1043 aa6.81□□□□□ -1.32
USP8-216ENST00000561206 SIRT2Q8IXJ6 389 aa6.81□□□□□ -1.32
USP8-216ENST00000561206 C1QTNF3Q9BXJ4 246 aa6.81□□□□□ -1.32
USP8-216ENST00000561206 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
USP8-216ENST00000561206 UBXN11Q5T124 520 aa6.8□□□□□ -1.32
USP8-216ENST00000561206 RNF141Q8WVD5 230 aa6.8□□□□□ -1.32
USP8-216ENST00000561206 MENTQ9BUN1 341 aa6.8□□□□□ -1.32
USP8-216ENST00000561206 KLHL14Q9P2G3 628 aa6.79□□□□□ -1.32
USP8-216ENST00000561206 ADAM30Q9UKF2 790 aa6.79□□□□□ -1.32
USP8-216ENST00000561206 IGFBP6P24592 240 aaPredicted RBP6.78□□□□□ -1.32
USP8-216ENST00000561206 ENOX2Q16206 610 aaKnown RBP6.78□□□□□ -1.32
USP8-216ENST00000561206 MAP6Q96JE9 813 aa6.78□□□□□ -1.32
USP8-216ENST00000561206 USP2O75604 605 aaPredicted RBP6.77□□□□□ -1.33
USP8-216ENST00000561206 FSHBP01225 129 aa6.77□□□□□ -1.33
USP8-216ENST00000561206 ITGB3P05106 788 aa6.77□□□□□ -1.33
USP8-216ENST00000561206 PGRP06401 933 aa6.77□□□□□ -1.33
USP8-216ENST00000561206 HMGA2P52926 109 aa6.77□□□□□ -1.33
USP8-216ENST00000561206 DSC3Q14574 896 aa6.77□□□□□ -1.33
USP8-216ENST00000561206 RNF111Q6ZNA4 994 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms