RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 AHCYL2Q96HN2 611 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 EXOC2Q96KP1 924 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 TCF12Q99081 682 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 RSPH9Q9H1X1 276 aaPredicted RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 ARFGAP3Q9NP61 516 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 CABP5Q9NP86 173 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 NGRNQ9NPE2 291 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 NMRK2Q9NPI5 230 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 TIMMDC1Q9NPL8 285 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 C1orf112Q9NSG2 853 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 FAM86C1Q9NVL1 165 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 C9orf78Q9NZ63 289 aaPredicted RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 LUZP4Q9P127 313 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 SUCOQ9UBS9 1254 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 SALL4Q9UJQ4 1053 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 PCDHA4Q9UN74 947 aa2.47□□□□□ -2.01
RTF1-207ENST00000561076 TNPO3Q9Y5L0 923 aaKnown RBP2.47□□□□□ -2.01
RTF1-207ENST00000561076 A0A1B0GTH6 734 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 A0A1W2PNR3 127 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 A0A1W2PQU0 124 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 FAM205CA6NFA0 338 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 METTL12A8MUP2 240 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 PRRT4C9JH25 899 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 PDE2AO00408 941 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 APAF1O14727 1248 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 GABRDO14764 452 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 PPEF1O14829 653 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 PMM2O15305 246 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 ADCY3O60266 1144 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 EIF4EBP3O60516 100 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 MMP20O60882 483 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 OFD1O75665 1012 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 PPM1BO75688 479 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 RNASEH2AO75792 299 aaKnown RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 ABLIM3O94929 683 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 HTR3BO95264 441 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 ZIC2O95409 532 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 EYA4O95677 639 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 ALDH1A1P00352 501 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 TP53P04637 393 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 POTEIP0CG38 1075 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 PABPC1P11940 636 aaKnown RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 NME1P15531 152 aaKnown RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 TARSP26639 723 aaKnown RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 GBP1P32455 592 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 RPIAP49247 311 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 SARSP49591 514 aaKnown RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 YARSP54577 528 aaKnown RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 PPP2R2AP63151 447 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 LSM11P83369 360 aaKnown RBP eCLIP2.46□□□□□ -2.02
RTF1-207ENST00000561076 SKOR1P84550 965 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 BTKQ06187 659 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 TYRO3Q06418 890 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 PCDH1Q08174 1060 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 TBX2Q13207 712 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 IFIT5Q13325 482 aaKnown RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 AP3B2Q13367 1082 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 TRIM14Q14142 442 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 MYBPC2Q14324 1141 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 PCBP1Q15365 356 aaKnown RBP eCLIP2.46□□□□□ -2.02
RTF1-207ENST00000561076 LONRF1Q17RB8 773 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 PLA2G4EQ3MJ16 856 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 EFHC2Q5JST6 749 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 HYIQ5T013 277 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 GPR158Q5T848 1215 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 MAP1SQ66K74 1059 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 INTS3Q68E01 1043 aaKnown RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 CDCA2Q69YH5 1023 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 SCARA3Q6AZY7 606 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 OVOS1Q6IE37 1185 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 ERAP2Q6P179 960 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 BRAPQ7Z569 592 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 TAB3Q8N5C8 712 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 GRIN3AQ8TCU5 1115 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 ZNF516Q92618 1163 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 GJA10Q969M2 543 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 HSPBAP1Q96EW2 488 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 FUBP3Q96I24 572 aaKnown RBP eCLIP2.46□□□□□ -2.02
RTF1-207ENST00000561076 CLUHP3Q96NS8 147 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 NSUN5Q96P11 429 aaKnown RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 ZIC5Q96T25 663 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 MENTQ9BUN1 341 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 RHOBTB2Q9BYZ6 727 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 CLEC4MQ9H2X3 399 aaPredicted RBP2.46□□□□□ -2.02
RTF1-207ENST00000561076 ZNF576Q9H609 170 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 ANTXR1Q9H6X2 564 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 NRBP1Q9UHY1 535 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 PHTF1Q9UMS5 762 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 INVSQ9Y283 1065 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 FRMD4BQ9Y2L6 1034 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 AFG3L2Q9Y4W6 797 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 HRH3Q9Y5N1 445 aa2.46□□□□□ -2.02
RTF1-207ENST00000561076 TNKSO95271 1327 aa2.45□□□□□ -2.02
RTF1-207ENST00000561076 TRIM75PA6NK02 468 aa2.45□□□□□ -2.02
RTF1-207ENST00000561076 SPDYE3A6NKU9 549 aa2.45□□□□□ -2.02
RTF1-207ENST00000561076 MEIS3P2A8K0S8 358 aa2.45□□□□□ -2.02
RTF1-207ENST00000561076 AQP7O14520 342 aa2.45□□□□□ -2.02
RTF1-207ENST00000561076 NEMP1O14524 444 aa2.45□□□□□ -2.02
RTF1-207ENST00000561076 PRPF3O43395 683 aaKnown RBP2.45□□□□□ -2.02
RTF1-207ENST00000561076 PQBP1O60828 265 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms