RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 SF3B3Q15393 1217 aaKnown RBP11.14□□□□□ -0.63
SNX22-206ENST00000560997 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
SNX22-206ENST00000560997 RBM28Q9NW13 759 aaKnown RBP11.14□□□□□ -0.63
SNX22-206ENST00000560997 TFCP2L1Q9NZI6 479 aa11.14□□□□□ -0.63
SNX22-206ENST00000560997 A0A1B0GTH6 734 aa11.14□□□□□ -0.63
SNX22-206ENST00000560997 FGRP09769 529 aa11.14□□□□□ -0.63
SNX22-206ENST00000560997 PTGDRQ13258 359 aa11.14□□□□□ -0.63
SNX22-206ENST00000560997 TTC38Q5R3I4 469 aa11.14□□□□□ -0.63
SNX22-206ENST00000560997 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
SNX22-206ENST00000560997 CDCA7Q9BWT1 371 aaPredicted RBP11.14□□□□□ -0.63
SNX22-206ENST00000560997 CARD6Q9BX69 1037 aa11.14□□□□□ -0.63
SNX22-206ENST00000560997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNX22-206ENST00000560997 COL22A1Q8NFW1 1626 aaPredicted RBP11.14□□□□□ -0.63
SNX22-206ENST00000560997 SYNRGQ9UMZ2 1314 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 STX10O60499 249 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 PRDX5P30044 214 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 CLCN6P51797 869 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 DPYDQ12882 1025 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 KRT222Q8N1A0 295 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 DCP1AQ9NPI6 582 aaPredicted RBP11.13□□□□□ -0.63
SNX22-206ENST00000560997 GNG11P61952 73 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 KARSQ15046 597 aaKnown RBP11.13□□□□□ -0.63
SNX22-206ENST00000560997 TBC1D9BQ66K14 1250 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 BLZF1Q9H2G9 400 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 ST7Q9NRC1 585 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 SOWAHDA6NJG2 315 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 TADA3O75528 432 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 DDAH1O94760 285 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 GTF2E1P29083 439 aaPredicted RBP11.13□□□□□ -0.63
SNX22-206ENST00000560997 SPATA1Q5VX52 437 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 PIK3AP1Q6ZUJ8 805 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 FBXO33Q7Z6M2 555 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 FERMT2Q96AC1 680 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 NOL10Q9BSC4 688 aaKnown RBP11.13□□□□□ -0.63
SNX22-206ENST00000560997 BRMS1Q9HCU9 246 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 FAM53CQ9NYF3 392 aa11.13□□□□□ -0.63
SNX22-206ENST00000560997 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
SNX22-206ENST00000560997 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 XDHP47989 1333 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 PPP1R3GB7ZBB8 358 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 CALM1P0DP23 149 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 CALM2P0DP24 149 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 CALM3P0DP25 149 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 ATP2C1P98194 919 aaPredicted RBP11.12□□□□□ -0.63
SNX22-206ENST00000560997 IL17AQ16552 155 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 CLEC4GQ6UXB4 293 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 MNS1Q8NEH6 495 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 CPLX3Q8WVH0 158 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 EPC1Q9H2F5 836 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 MRPL44Q9H9J2 332 aaKnown RBP11.12□□□□□ -0.63
SNX22-206ENST00000560997 A0A0U1RQJ8 604 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 RBL2Q08999 1139 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 SLC51AQ86UW1 340 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
SNX22-206ENST00000560997 ATRIPQ8WXE1 791 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 UBXN4Q92575 508 aa11.12□□□□□ -0.63
SNX22-206ENST00000560997 THRAP3Q9Y2W1 955 aaKnown RBP11.12□□□□□ -0.63
SNX22-206ENST00000560997 MCM7P33993 719 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 CDKAL1Q5VV42 579 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 MTRQ99707 1265 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 IRX2Q9BZI1 471 aaPredicted RBP11.11□□□□□ -0.63
SNX22-206ENST00000560997 ADD3Q9UEY8 706 aaKnown RBP11.11□□□□□ -0.63
SNX22-206ENST00000560997 CTNND2Q9UQB3 1225 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 AKR1B15C9JRZ8 316 aaPredicted RBP11.11□□□□□ -0.63
SNX22-206ENST00000560997 ORC4O43929 436 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 SCG2P13521 617 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 CASQ1P31415 396 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 NLRP5P59047 1200 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 E2F4Q16254 413 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 TXNRD3Q86VQ6 643 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 IGSF22Q8N9C0 903 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 GSDMAQ96QA5 445 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 LAMB1P07942 1786 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 BMP15O95972 392 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 RAD9BQ6WBX8 426 aa11.11□□□□□ -0.63
SNX22-206ENST00000560997 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
SNX22-206ENST00000560997 SRP68Q9UHB9 627 aaKnown RBP11.11□□□□□ -0.63
SNX22-206ENST00000560997 AHDC1Q5TGY3 1603 aaPredicted RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 NUTM2BA6NNL0 878 aaPredicted RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 NUTM2EB1AL46 878 aaPredicted RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 PCP11498 1178 aaKnown RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 CDC25AP30304 524 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 CCT6AP40227 531 aaKnown RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 PBX1P40424 430 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 RCSD1Q6JBY9 416 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 PTF1AQ7RTS3 328 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 CCDC34Q96HJ3 373 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 FHOD1Q9Y613 1164 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 KIAA1551Q9HCM1 1747 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 TSPY2A6NKD2 308 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 HIBADHP31937 336 aaKnown RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 RPS8P62241 208 aaKnown RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 GABPB1Q06547 395 aaPredicted RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 GPKOWQ92917 476 aaPredicted RBP eCLIP11.1□□□□□ -0.63
SNX22-206ENST00000560997 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 SRRTQ9BXP5 876 aaKnown RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 FAM205AQ6ZU69 1335 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms